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13-0526-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3103564 [Map]; Strand: c
      • AT1G09575.1 - [+] show detail - Protein of unknown function (DUF607)
        Distance: -639; Region: promoter
    Flanking Genome Sequence: 13-0526-1 - 5-prime edge 
    CTTCCAGGTA TGTCAATATA TTAGTCGAAA ATGTTTTAGA TCGTTTCTAA 
    TATGCAATCA AAATGAGACT TGTTTTTTGT TTTTCATAGT AGTGCAAAAA 
    GATGGTGATG TCTATATATG CTCATATGAG TTTTTCACAA CGAATATTAG 
    TGAATGCAAG CTAGTAGCCT AGAATATGGA TTTGTAATTA GGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3103680 [Map]; Strand: c
      • AT1G09575.1 - [+] show detail - Protein of unknown function (DUF607)
        Distance: -755; Region: promoter
      • AT1G09580.1 - [+] show detail - emp24/gp25L/p24 family/GOLD family protein
        Distance: -908; Region: promoter
    Flanking Genome Sequence: 13-0526-1 - 3-prime edge 
    CCTGGAAGTA CCTGCTTTCA ACAGTTTGCT TATATGATAA TGTGAATGAA 
    GAAGACGAAG GAAAATAAGT TTTAGCCTTT CTATCCACGG CTTGAGAGTT 
    TTTGCATTCT TTTGAAACGA AAGCAATAAC AACCTAATTA TGTTCTCTCT 
    TGTTTTGCCC TTTTTCTCTC CTTGAGAATA GTAGATTTGA TCGTTATACG 
    ACCACAAGGG CCAAATTCTT TATTTAAACT TTTTTTTTTN GGNANTTAAA 
    NCCCANTTTC NTNGGAAANA AAANCTANTC CNTTTTAGGN CCCCNCCTAA 
    ATNTNANNAN ANTTAANGNA AAAATNCAAC TNGGNAATTN CCANCCNGGG 
    CCGNGAACCN CCCNNGCCCC CTANAAA

AT1G09575.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF607)
Computational Description
Protein of unknown function (DUF607); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT1G57610.2); Has 384 Blast hits to 384 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 56; Plants - 127; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09580.1

Model type
Protein coding
Short Description
emp24/gp25L/p24 family/GOLD family protein
Computational Description
emp24/gp25L/p24 family/GOLD family protein; FUNCTIONS IN: protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport, transport; LOCATED IN: endomembrane system, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038), emp24/gp25L/p24 (InterPro:IPR000348); BEST Arabidopsis thaliana protein match is: emp24/gp25L/p24 family/GOLD family protein (TAIR:AT1G57620.1); Has 1762 Blast hits to 1760 proteins in 238 species: Archae - 0; Bacteria - 0; Metazoa - 806; Fungi - 509; Plants - 239; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).
Link
InterPro Scan - TAIR