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13-0577-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4839423 [Map]; Strand: w
      • AT1G14140.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G14150.1 - [+] show detail - PsbQ-like 2
        Distance: -430; Region: promoter
      • AT1G14150.2 - [+] show detail - PsbQ-like 2
        Distance: -430; Region: promoter
    Flanking Genome Sequence: 13-0577-1 - 3-prime edge 
    ATGGTTCGGG ATCCGCTTCT GGTGCGCATC GGATTGGCGC TTTCGGAGTC 
    GTATCGGAGA TTGCGAGAAA GGAAGGAGTG ATTGGTCTCT ACAAAGGTCT 
    ATCTCCGGCG ATTATCAGAC ACCTGTTCTA CACGCCTATC AGAATCATTG 
    GATACGAGAA TTTGAAAGGA CTCATCGTCA GATC

AT1G14140.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: transporter activity, binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: uncoupling protein 2 (TAIR:AT5G58970.1); Has 28913 Blast hits to 14062 proteins in 461 species: Archae - 0; Bacteria - 4; Metazoa - 12057; Fungi - 8822; Plants - 5230; Viruses - 3; Other Eukaryotes - 2797 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14150.1

Model type
Protein coding
Short Description
PsbQ-like 2
Curator Summary
Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.
Computational Description
PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit Q-2 (TAIR:AT4G05180.1); Has 142 Blast hits to 142 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G14150.2

Model type
Protein coding
Short Description
PsbQ-like 2
Curator Summary
Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.
Computational Description
PsbQ-like 2 (PQL2); FUNCTIONS IN: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; INVOLVED IN: photosynthetic electron transport chain; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: PsbQ-like 1 (TAIR:AT3G01440.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR