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13-0580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1267405 [Map]; Strand: c
      • AT1G04600.1 - [+] show detail - myosin XI A
        Distance: 0; Region: exon22 (CDS)
    Flanking Genome Sequence: 13-0580-1 - 5-prime edge 
    CTCTCCAGCC ACATTGAGTA GTAATTGCTG CTTTCTTCGT TCTCACATAA 
    CGCTGATGAC ACAAACATNT TCTGATTTGA CTCTGCGTAG CCAGTANGTT 
    TCATGTCATC AATACTCANA CNAGTAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18425338 [Map]; Strand: c
      • AT2G44670.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-0580-1 - 3-prime edge 
    CGTATTACTN NGGTTTNNNG GGTTGTGAAG AGCCNCACTN TATGGAATNG 
    TGTTNNNTNN GCCGGAAACN CCTTGGACTN AACTCCGATA TNTTCNTGTA 
    CAGGTNTGGA TGNCGATTCA AACATAGAAT GATTAAACNT TCAATCCGAG 
    TTNNGAGAAT C

AT1G04600.1

Model type
Protein coding
Short Description
myosin XI A
Curator Summary
member of Myosin-like proteins
Computational Description
myosin XI A (XIA); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: myosin complex; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Prefoldin (InterPro:IPR009053), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI D (TAIR:AT2G33240.1); Has 140144 Blast hits to 79260 proteins in 3527 species: Archae - 2295; Bacteria - 25176; Metazoa - 58445; Fungi - 12073; Plants - 6566; Viruses - 744; Other Eukaryotes - 34845 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Computational Description
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT4G17670.1); Has 521 Blast hits to 521 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 521; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR