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13-0626-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6302011 [Map]; Strand: w
      • AT1G18310.1 - [+] show detail - glycosyl hydrolase family 81 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-0626-1 - 5-prime edge 
    NCTGTGAACC CTCCAGCCCA TGAGTGTANC TTGAAAAGAT CAAAATTACT 
    CAAACGCGGA TANCTAGAAT NTGAATTATT ATCATCTTTT CTCCCAANCG 
    TNATGAAATC CGCCAATAGA CTGTACGCTT GAGCTCTGTA TCTCTCTCCC 
    CACAAAGGAT CAAACTTANC GAGCACGGCA ATAGCGTAGA GAAAGTAACC 
    AATATGGTAA TGATGATCAT NATATATACC GAACCCGAAA TCNGCNTGTG 
    AGTCTTTTGA TCCTTGCTTC GNGATCAAAC CTNCCCATTT AGGATCATAC 
    AGAAAGCCGT NAGGTTTGAA GCTNCCATCT AACCACGGCT NAATCATGTN 
    CTTCAGGTAA GTNACAATCT TCGGAATCAC ATCGAGATAG CAAACTTCCT 
    CNGCGATTAA GGCAAACCTA NCTGCTCTGG CTATTAATTT CCCGTNGAAA 
    TACGACGAAC TCNNGACCTC ANCTGNGGAA TTACCANNNN GGGNCGNNNN 
    CCNCGCNNGC CCCNNNNNNN NGGGGGGGGG GGNTAAAGCG GCCCCCCCCC 
    GNCCCNAAAN NGGGNNTNTT NGGGGNNNNN NNNCCNCNCC CCCCCCNCNN 
    NNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6301895 [Map]; Strand: w
      • AT1G18310.1 - [+] show detail - glycosyl hydrolase family 81 protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-0626-1 - 3-prime edge 
    TTAACAGAGT TTTGGGACGG CCGGAATCAA GAGAGCACAA GCGAGGCCGT 
    AAACGCTTAT TACTCCGCCG CTTTATTAGG GTTAGCTTAC GGCGACAAAC 
    ATCTGGTGGA GACGGCGTCA ACGATCATGA CGCNTTGAGA TACACGCCGC 
    GAAGATGTGG TGGCAGGTAA CTATTCTTGA ATCTTGGTTA CGGCTATCAA 
    CAAGTTAGAA TTGGTAGATA TGTCCCTCTC TATATGAAAA ACCAAACTAA 
    AAATTAAGAC ACCAAAACCA AAACATAATT TTCGTAATGA AGATATACTT 
    TTTAAAACAA TATTTAAATC AAAAGAAAAT CATATTGAGC CAGTTACTGT 
    TATTCTTTCT TGGTGGACAG GTGAAGAAAG GTGAAGCT

AT1G18310.1

Model type
Protein coding
Short Description
glycosyl hydrolase family 81 protein
Computational Description
glycosyl hydrolase family 81 protein; FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity; INVOLVED IN: cell wall macromolecule catabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 81 (InterPro:IPR005200); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 81 protein (TAIR:AT5G15870.1); Has 441 Blast hits to 435 proteins in 142 species: Archae - 0; Bacteria - 86; Metazoa - 4; Fungi - 179; Plants - 58; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Link
InterPro Scan - TAIR