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13-0632-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 109240 [Map]; Strand: c
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -437; Region: promoter
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: -629; Region: promoter
    Flanking Genome Sequence: 13-0632-1 - 5-prime edge 
    TAGGAGCAAG TTGCCATGCA CTCTCCAAAA TAAAATAAAA AACAGACAAA 
    GACTTTAGAC TTGTGACTTT TCGACCTCAT TATGTACTTA CTTACTTCAT 
    CTTCTATTTG GCACCCACAA ACAGTAGTTT CCACTTTCTT CCTCAATAAG 
    TTCCATTTTT GGATTCTTTC CTATTTTTAC ACAAATTTGT TGTATTCTAA 
    AAAGTTATAT ATTCTATTTG CTGGGCTTTA GATATGGGCT GGCTCTGGAT 
    ATGTGTGTAA TGGATACATA TTAGTAAATA GTTAAGTCCA AAAAAGAAAT 
    TATAAACCCC CTATGTAGTT TGAAAACTGG ATCATGTGAC AAAACGAGCA 
    GGGAAGGCCC ATAATAAGGC CTAATAAGTA AGGTAAGCCC ACAGAGAAAT 
    ATACTTACGG GCTTGGATTT CCGAACCTTC CTAAAAAGTG GGACCTACGC 
    GGCTGAGAAG AAAGACGAAG GCCATATCAG ACCGGCGATA ACTGAAAAGT 
    CAAAAGTCAA AATTCAAGAG GAAGAGGAGT TTCTAATCAT GTCTCTCTCT 
    GTTTTCTTCT TATTCTTCTA TCAAACCGTC AAGTTGGGAA ACAAAACAAA 
    ACTCGCAAGT TTAACAACGC GTCTTCTACC TCCTCCTCAT CGGACTATTT 
    ATCTATAGTC TTCGTTAGAT CAATTCCTCT GTTTTACTCC TAAGTTTCGA 
    GATCCACATT TCTTTTT

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR