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13-0635-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 128404 [Map]; Strand: w
      • AT2G01220.2 - [+] show detail - Nucleotidylyl transferase superfamily protein
        Distance: 1938; Region: intergenic
      • AT2G01240.1 - [+] show detail - Reticulon family protein
        Distance: 36; Region: intergenic
    Flanking Genome Sequence: 13-0635-1 - 5-prime edge 
    CATCTGAATA TCTGATTATG TAGCTCTATA CTTTTTACAC GGAATTTTAC 
    TACTAGGAAT ATGATAATAG CATATAGAGG TTGGTTGGCT TTCAGTCCGG 
    TCATGAACTA CTCCACCTTG GGGGCCCTAG GAATTTTAGA GACAACNTTG 
    TTTGAATACT TCAAGTAAAT TGTTCTTCTC TTCTGATACT TTCCCCATGA 
    AACTGTCAAT GAGCTCTTGA AATTGCATGT AAACAACCGG GATTGTCATC 
    GAGCAAACCA AGCCTGCAAG GATGTGCATG GTTATAATAA TAGTTATTAG 
    AAACAAATAG AAGGACGACA TAAAAAGACA AGGAGATCGA TAACAGGTCA 
    TGAGTTATAT ATATGTGGTC TTACATATAT ACAAAATTGT GAGGAGGCTG 
    ATGTAGCTCC CAATGTTGTA TATGATGGCC ACATAAAGGA TGGTCTGCCA 
    CATGAATTTT TATATAAATG AATCTTTAAA CTTGTATATG GAAACTAGAA 
    AGTTATGATG TCGA

AT2G01220.2

Model type
Protein coding
Short Description
Nucleotidylyl transferase superfamily protein
Computational Description
Nucleotidylyl transferase superfamily protein; FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cytidylyltransferase (InterPro:IPR004820); BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT3G27610.1); Has 429 Blast hits to 422 proteins in 57 species: Archae - 6; Bacteria - 30; Metazoa - 0; Fungi - 7; Plants - 76; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01240.1

Model type
Protein coding
Short Description
Reticulon family protein
Computational Description
Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR