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13-0656-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5262578 [Map]; Strand: c
      • AT3G15536.1 - [+] show detail
        Distance: 1256; Region: intergenic
      • AT3G15540.1 - [+] show detail - indole-3-acetic acid inducible 19
        Distance: -1446; Region: intergenic
    Flanking Genome Sequence: 13-0656-1 - 3-prime edge 
    TTTGGAAACA TTAAAGGTAA ACTAGAGATA TGGGAGTATG GAACTTAATC 
    TCTTTATGTG GTTGTATTTC ATATAATTTC ACGTGGCCCA ACTTGTTTCT 
    GTCAATCCAT TGATCAAAGT TGGTAGACAA GAGTGAACCC ACACACACTC 
    ACACACATAC ACACNGGTCG ATCTTTTTTT CTATTCTCGT GTCCCTACGT 
    CCTCTAAACC CCATCATTAT ACTTCTTGTG TTTTATTGGT ATGCTTGAGC 
    TAGAGATAGT TAACAACTAC CCAACAATGC GGGTCTGGCT TAGTTTGAAC 
    CTATTCGAAA CTAGTTATAC TCCGCTTGAA GTCATTGGTT CGAGACTAAC 
    TTTGGAGATG AGTATCATAA ACAGCTCTAA CTTAAGATTA CAATACATCC 
    TCTTGTTAGT CTAAGTTGAG AGGTGTTGCC ATTGACTATA TATTTCTTTG 
    GGAATTTGGT TTACCAGGAT GTTGCAAAGA AGATTTAAAT AGTTATAAAT 
    TAGTACAAAT TCAATCCATA TGATATGATA TTCAAAAAAC AAAAAAAAAA 
    AAAACNNNTT TNAAAGNNCN NCCCANTTTT TATTTNNTTA ANNCCGNTTT 
    TTTNTTGNAN CCCNTAAAAA AANTCCNCCC CANCCNTNGN AAGGGGGGTT 
    TTNNCTANAA ANTTGGGGAG GNNATGGGNA AAAANNNANC CNNNACCCNA 
    AANATNNTNA AAANCCNGTT NNNCTTNGNA CTTTTGGCCN ATNCAAAANN 
    AAACGGGGNN TTTTT

AT3G15536.1

Model type
Other RNA
Curator Summary
Unknown gene
Link
InterPro Scan - TAIR

AT3G15540.1

Model type
Protein coding
Short Description
indole-3-acetic acid inducible 19
Curator Summary
Primary auxin-responsive gene. Involved in the regulation stamen filaments development.
Computational Description
indole-3-acetic acid inducible 19 (IAA19); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: phototropism, gravitropism, response to auxin stimulus, response to brassinosteroid stimulus, stamen filament development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indole-3-acetic acid 6 (TAIR:AT1G52830.1); Has 1781 Blast hits to 1780 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1780; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR