1. Home
  2. Mutant Lines
  3. 13-0705-1

13-0705-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19825019 [Map]; Strand: w
      • AT1G53170.1 - [+] show detail - ethylene response factor 8
        Distance: -2767; Region: intergenic
      • AT1G53180.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -6422; Region: intergenic
    Flanking Genome Sequence: 13-0705-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAGG TGGAAACATA CTATCACACA ATGAATCCAT 
    TTATTTTCCT AATCTTGATT GTACTACCAA ACAACCTATA AGACGATCTG 
    CTATATAAAG TGCGTTAGTT TAGATGCCAT CATACTCAAA TGTTACNGAA 
    CATTTTTTTT TTGAAGGGTT TTCTGANGGA AATAAATGGG CANCANCAAG 
    CGANAAATTA AAAGCTCTCC TNTCNCAATT AAANANACNC ANATNTNGGC 
    NTTAAAATCN GGAAAATTAC GGNCAACANC ANCNTCANCT TTNANTTTNN 
    TANCNCCACC AAAAAATNAG NGGGGCCNCN AAAAGCCCGN NGNNAATNAN 
    CANCCCGGGG NGGGNACCAN CCGGGCCCCN TAGGGNGGNN NNNNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19825018 [Map]; Strand: w
      • AT1G53170.1 - [+] show detail - ethylene response factor 8
        Distance: -2766; Region: intergenic
      • AT1G53180.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -6423; Region: intergenic
    Flanking Genome Sequence: 13-0705-1 - 3-prime edge 
    CTTAAAACGG NNGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AGTNCGTGTG GAACTTATGA TGCATTGATT AATCACTCAA TTTTATAACC 
    TTTTCTGTTA CAAACATGTG CTTTGCCTTG GAGTCTTCCT ATTCTACTAG 
    ATTATACTTA TTANTTAACA GTAGTTGACA TACAATAGTC TTCTAAACTA 
    CAAAAAAAAT ACAACAAATG TATTCGATAG TATTCTTTTT CTTTTTACCA 
    AATAGGCATG TAAAAAACGA TCAATTGGGT TGGTTATATG TCAAAATAGG 
    GAGACTCAAG ACAAAACGAG ACTCAAAACT CTCGGTTAAA GAATGCCAAT 
    CAACATGAAT AGAGATGTCA ATCATTAGGC CGACAGTAGG TCTTGGTGGC 
    CTAGTCAGGC TCAAGAGGCA GTCGATCAAT ACTCATTCAT GGTATCGATC 
    GATTTTGTCG ACAAAATGGA ATTGGCATGA TGAAATATCG ATCAATTATT 
    CAACAAAATA AATTGACTTG TCTTGCCTCT AACGGGCTGT TGATTGATGC 
    AACANAGAAG CTNTCGATCA ACACCTTCAT TTCTTGTATT TTTTNCCTTC 
    AGTTNGGCCC CAAAAACTTT ANTCTTGTTC GAATCCAGNT TTTTATCTAA 
    ACTGACTCTA TANANACCAA NAGATNCTTT ATAACACTGA AAACTTATTG 
    NGGTNTATTN GATTNANAAG TTAGTAAATA TTCNTACCCC TCAAAGNTTG 
    NAACANAATT TTNAGTTGAT NAAGTTANNA NAGNTTTTTG AAANGTGNTT 
    TTCCAACNCT ATTGAANGTN

AT1G53170.1

Model type
Protein coding
Short Description
ethylene response factor 8
Curator Summary
encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Computational Description
ethylene response factor 8 (ERF8); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 4 (TAIR:AT3G15210.1); Has 5970 Blast hits to 5718 proteins in 254 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5959; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G53180.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR