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13-0717-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16553914 [Map]; Strand: w
      • AT4G34680.2 - [+] show detail - GATA transcription factor 3
        Distance: 0; Region: exon1 (CDS)
      • AT4G34680.1 - [+] show detail - GATA transcription factor 3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0717-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAA GAAGAACAAG AACATGATTG TGTCTTTAGT 
    TCACAACCTT GCATCTTTGA TCAACTTCCT TCTTTGCCGG TAAATTTCTA 
    AACTTCTTTA TACCTTTTCT TTCTCTTCTT ATAATCGAAA GATTTTAAGT 
    TATATTTTTC TTGATTTCTT TTTTTTTGGG ATATTTTTAG GATGAANATG 
    NGGAANAGCT TGAATGGGTA TCTCGNGTTG NGGATGATTG TTCATCACCA 
    NAAGTTTCAC TTNTNTTAAC ACAAACNCNT NAAACCAAAC CAAGNTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16553902 [Map]; Strand: w
      • AT4G34680.2 - [+] show detail - GATA transcription factor 3
        Distance: 0; Region: exon1 (CDS)
      • AT4G34680.1 - [+] show detail - GATA transcription factor 3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0717-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTGCTCTT 
    GTGAAGAAGA AACAGAGACA ACTTCTTCTT CTTCTTCTTT TTGACCTTCT 
    GAGAAATCGA GGAAACACTC AACGGAGAAA TCTTCCGGCA AGGAAGAAGT 
    TCGGCTTAAA TCTTCCGACA CAATCACTTG ATGATGTTTG AGAGATATAG 
    TAGATTCTCC TCTTAGACTT GCCTTTAAGG CTCTAGCTTC TGTCCACAGC 
    TCCATTCACT CTTTAACACA TACACACATA CATATAGAAT T

AT4G34680.1

Model type
Protein coding
Short Description
GATA transcription factor 3
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 3 (GATA3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 7 (TAIR:AT4G36240.1); Has 1460 Blast hits to 1422 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 551; Plants - 835; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G34680.2

Model type
Protein coding
Short Description
GATA transcription factor 3
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 3 (GATA3); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 7 (TAIR:AT4G36240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR