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Mutant Lines
13-0722-1

13-0722-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 878046 [Map]; Strand: c
- AT1G03510.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -499; Region: promoter
- AT1G03520.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
  Distance: 0; Region: exon4 (CDS)
- AT1G03520.2 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
  Distance: 0; Region: exon5 (CDS)

CTTTGATAAA ACTAACAAAA TCGGTTATAC GATAACGGTC GGTACGGGAT 
TTTCCCATCC TACTTTCATC TGACGACTCG GTGTTGAAAC CAGGACCTGG 
TTCTGAGAGG TTGCAGGAGC TTGTTCAAAC ACTTTCCTCT GAAGAATTTA 
GGCGAAAACA GTGTTCTTGA AGTTATCTAC CTGATGACGC AAAATATAAC 
NGTTGTACAG TATATTGTTT TGTTTGATTA TAAATTTTTG GTTATAGAAA 
TTTCTTCGAA ACACATGAAT TAAGAACAAG TGACGTGCAG TGGGCTTTTA 
TGGGCCGTAT AGCGTCAGTG AAGTGGCATT GATAGGGCCA TATTTATAGG 
GGACCAAGAA TAAGGCCCAA TTAGCTTGTA CAGCCGAAAA TAAAAAAGAT 
CGCCGTTGCC GGGGATCGAA CCCGGGTCAC CCGCGTGACA GGCGGGAATA 
CTTACCACTA TACTACAACG ACTTTGTTGT TTGGTTGTTT AGAACATAAC 
TATTTAACAA CAAACTAATT TGTATTTCTT GAAGGCTGAC GCCAACACCG 
AAAGCTCCAT CTCCACCACT CCATGTCTTC TTCGTACGCG TCGAGCTGCA 
CTAAATTGAT CTCTCTCACC AAACAATTAA GCTCTTACGC GAACCAAGGA 
AACCATGAAC AAGCTCTTAA TCTCTTTCTT CAAATGCATT CTTCTTTCGC 
CTTACCTNTC NATGCACACG TNTTNTCACT CGCTCTCAAA TCGNGCGCTG 
CANCTTTCCG NCCTGTTCTN GGGGGATNAG TCCATGCNCA CTCCGNCAAT 
CCATTTTCTG TCGAACCCAT

3 prime edge [+] show sequence

Chromosome: 1; Position: 1505076 [Map]; Strand: w
- AT1G05200.2 - [+] show detail - glutamate receptor 3.4
  Distance: 0; Region: exon1 (5UTR)
- AT1G05200.1 - [+] show detail - glutamate receptor 3.4
  Distance: -241; Region: promoter

CTTTAAANCG NCAGAGGTAT TTTACTGACC GTTACCGACC GTTTTCATCC 
ANCATAAAGA AGAAAGACAG AGAAAAGAAG TCGAAGAAGA ACTGTTTCTG 
CGCTCAAGCA AAGAATAATT CGTAATATTC TCTCTCTTTT TTCCTTTTTT 
CTTCCTTATT ATTACCTTAT TTTTTTGGTA CAGTTATGAA ATTTTGTAAA 
TTTTGTTTTG AAGTGCTATT TCTGGAGTGG TCAGTGAAGA CGTAGGCCAA 
GGTGTGGGGT ATCCATGCCT TACTTGTGTC CTCATACTAT TCNAGAATCA 
AATTTTTACA GTNGGCTCTT ATNGGNAACT ATCATTTATT AAGATAGTNA 
ATGCATTTTT CTTTTTGGTT ACAAGGGATA GTGAANTGGT ANTTAGGNTN 
NCNTACNTAT GTNCATGAAN CAAAATATTA NNTNGAAANC TGTGAATGNG 
ACNACCTTAA TNGCTCCAAG GCCGNCTTCN GTCTAAAGAA TANNTTCNCC 
TNANNNGNTN GTAAANTNNA NTTTCGCNNN TTGTNAANAA TATTANCCNN 
NNACGCTTNG CCNAACNTTC NTNNNGCAAT CTTANATNNN TNCATATANG 
ATTNTCATAT ANATATCAAG GCGTANNTNA NANCACATGG NTNCACGTGT 
NTCGTGNCNN TGTATAAGAG GTTNNCTNAN GGAACTCGAN ANANANANAN 
NATCNAGATA NNTGNGANNN NNNANANNAN NCNCCNNNTT AAAAGTATNN 
ATTTNNNNAT CATNANAACC ACCAAAATAT NNTACNCCTC NNTATNCNNG 
ANNCTNNNGA CGCNANGANC GANGNANNNN TCNAGANCNA NCATTANNTA 
TGNCTTANNN AN

AT1G03510.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1); Has 33405 Blast hits to 13221 proteins in 227 species: Archae - 0; Bacteria - 37; Metazoa - 55; Fungi - 85; Plants - 32781; Viruses - 0; Other Eukaryotes - 447 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G03520.1

Model type: Protein coding
Short Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G03340.1); Has 943 Blast hits to 943 proteins in 116 species: Archae - 0; Bacteria - 40; Metazoa - 553; Fungi - 0; Plants - 315; Viruses - 14; Other Eukaryotes - 21 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G03520.2

Model type: Protein coding
Short Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT4G03340.1); Has 942 Blast hits to 942 proteins in 115 species: Archae - 0; Bacteria - 40; Metazoa - 553; Fungi - 0; Plants - 314; Viruses - 14; Other Eukaryotes - 21 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05200.1

Model type: Protein coding
Short Description: glutamate receptor 3.4
Curator Summary: member of Putative ligand-gated ion channel subunit family
Computational Description: glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 6705 Blast hits to 6546 proteins in 599 species: Archae - 47; Bacteria - 1309; Metazoa - 4441; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05200.2

Model type: Protein coding
Short Description: glutamate receptor 3.4
Curator Summary: member of Putative ligand-gated ion channel subunit family
Computational Description: glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR