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13-0733-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 874205 [Map]; Strand: w
      • AT2G02990.1 - [+] show detail - ribonuclease 1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-0733-1 - 5-prime edge 
    CTTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCA ACACTGGCTT GCCCAAGCGG TTCAGGTGAA 
    GCGTTTTGGG AGCACGAATG GGAGAAGCAT GGTACTTGCT CTGAATCGGT 
    TATCGATCAA CATGAATATT TCCAAACCGC TCTTAACCTT AAACAGAAAA 
    CCAATCTCCT TGGAGCTCTA ACCAAAGCCG GTACGTTTTG ATGTCAAAGT 
    ACCTTTTTAT TTTCCCGGTT TGGATCTCAT TGGTCTAACT ATTGGTTTAT 
    TATGTAATAG GGATTAATCC GGATGGAAAA TCTTACTCTT TGGAGAGCAT 
    AAGANATTCG ATAAAAGAGT CAATTGGGTT CACTCCTTGG GNTGAGNGTA 
    ACAAAAATGG NTCTGGNGNT AGCCAATTGN NCCNAANGNT ATTTTTTTGT 
    TGACCNGGNN NGGGTNCNGN TTAAANNANA TGNNGGNNTN CCNNCNNGGN 
    AANGGGNGGG CNNCNANNNN GNTNNNAGNN NGGGNNNNNN AANNGNNNGG 
    NNNNNNNGNG NANNNTNNNN G

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 609133 [Map]; Strand: w
      • AT2G02310.1 - [+] show detail - phloem protein 2-B6
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-0733-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    GTATGAGTAC CCAAATCTTA TCCCTAGGAA CTCATTATTC AGTTTACATT 
    GTGTACAAGA TAAAAGATGA ACGTCATGGC TTACGAGATT TGCCTATACA 
    AGTTGGTGTA GGATTTAAAG GCCAAGAAAT GCCTAAACAA TTCATATGCT 
    TTTGACGAGT CTACCGATAA AACCAAAGAG TGGCCAAAGA AGAAGCTAAT 
    GAAATCAAAG AAGAGGGGAG ATGGGTGGAT GGAGGCAGAG ATTGGGGATT 
    TCTTCAATGA TGGAGGATTA ATGGGTTTTG ATGAAGTTGA AGTGAGTATT 
    GTAGACGTTA CTTCACCTAA TTTGAAGTGT GGTGTGATGA TTGAAGGAAT 
    TGAATT

AT2G02310.1

Model type
Protein coding
Short Description
phloem protein 2-B6
Computational Description
phloem protein 2-B6 (PP2-B6); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 502 Blast hits to 484 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 498; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02990.1

Model type
Protein coding
Short Description
ribonuclease 1
Curator Summary
member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.
Computational Description
ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink).
Link
InterPro Scan - TAIR