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13-0735-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13867135 [Map]; Strand: w
      • AT4G27840.1 - [+] show detail - SNARE-like superfamily protein
        Distance: -848; Region: promoter
    Flanking Genome Sequence: 13-0735-1 - 5-prime edge 
    GATAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCATC GTGCCCAAAC GCCAAGTGCT TGACGACGAC 
    GATGGTCTAT ATGGTACGTT TCTAATCATT CCTTTATTGT TATTTAGGTT 
    TTTGATTTAT GAGTAGGATG TACATTGTTC TTACATAGAA TTTTAGTGCT 
    AGAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 13867130 [Map]; Strand: w
      • AT4G27840.1 - [+] show detail - SNARE-like superfamily protein
        Distance: -843; Region: promoter
    Flanking Genome Sequence: 13-0735-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTGGATTCCA TTGAAGTTGA ACCTGGTGTG AATGATCACA AAGGGAGAAC 
    CAGAGAACAA TTATATTTTA TATATCTAAC GCGTTTTTTA ATTTTTAAAA 
    TCGTACTATT GAACCCACCA TGAGATTAAA TAAAGAACCA TGGAAAGGCT 
    AAACAATGAC CGAGTTTTAT TCTTCAAATA AACATTATGA TCTTATGACT 
    TTTTATCTTC ATTGTTTATG ACTTAGTGAA TGTTAATTAC AGTTGACTAA 
    TGGAATTATT AGCATAGTTA GTACTTTGAA TTTTAGTATC GAAGCAGTCT 
    CAAATCATAG TCAACTTAAT ATGAAATTAA CTTAGAGAAA TAGTATTATT 
    GTGGCGTACA TGACCTGATC ACTAACCTTG CGTAAAGTAT TGAAGATTTA 
    TTGATTATGG GTCGTTGGAC GGAAGGACTT GTACTTGAAA GTCTTTTCTG 
    TTAATATTGG GCTTAGAGGC CCATCATTTT AAAGGCTAAG AAATTCTTTA 
    TATCTTCTAT TCTTTTTTTT TTTTCCCGGN TTTTNTTTTT NTTTAAGNGN 
    TTCCNNAGGN TTTTTNNCCA NNNNCACTNN NAANNGGGGC CAAAANCNAA 
    AAAACAATTN TCCCGGGCCC CNAAANTNCC TNNGGNNTAC CTGNCCGGGG 
    CCCCCCCCNG GGNGGAAANA ANCNTNNANN TNNNTTTCCC CGNGNCNTTN 
    TTCCTTTCCC CATTTTTNAA NNNGGGGGTT NCTGGAAANN AAANNTCTCN 
    NGGGCTTT

AT4G27840.1

Model type
Protein coding
Short Description
SNARE-like superfamily protein
Computational Description
SNARE-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin-like (InterPro:IPR011012); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52990.1); Has 279 Blast hits to 279 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR