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13-0748-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23641525 [Map]; Strand: w
      • AT1G63730.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -245; Region: promoter
    Flanking Genome Sequence: 13-0748-1 - 5-prime edge 
    CNNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TNNCATTNCG GTAAANANAA NCNAGCACAG 
    AAACCGGTAC ATTNCGGTTT ACTANCNGGT GACAAGCCTG GCTTATTANC 
    ACAGTTNANC CAAANAATTA TTTCGACTTA TATGAGTTAG AGTTATGACG 
    TGACTGATNA CTTNATATCT CTCTTTCTCN ANAAAAGNCA ATGGTGAATA 
    CGCCTTTTCC ACAGATTTTT GTGTATGTGA ACTTCAACTT TTCTCGCTAG 
    TCGCTACTCT AGTCTCTCAT GGCTTCCTCT TCTTCTTCGC CTCGAACCTG 
    GAGATATCGC GTTTTCACGA GTTTCCATGG ACCAGACGTC CGTAAAACAG 
    TTCTCAGTCA TTTACGCAAA CAGTTTATCT GCAATGGGAT TACCATGTTC 
    GATGATCAAC GGATCGAAAG AGGTCAAACC ATTTCCCCTG AACTCACACN 
    AGGGATTAGG GAATCTAGGA TCTCNATTGN GGNGCTCTCG AAAAATNATG 
    CTTCATCNAN CTGGTGTTTG GATGANCTGN TGGAGATTTT GAAGNGCNGG 
    AAGATTTGGG CNNATANNGA NGACTGNNNT TTNCGGGGGN GANCCNNTGN 
    NGNGNGNNNC NNNNCCGGNN AATTTGGGAN ANNANNCNNG GCCNNNNNNC 
    NCNCCNNCCN NNNNGGGGGG GGGGGGNNTT NNNNACCCGG GGGGGGGGNN 
    NCGGGGNNTN AANAAGAGGN NNNNNNNNCN CNNCNCCGCG NGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23641515 [Map]; Strand: w
      • AT1G63730.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -255; Region: promoter
    Flanking Genome Sequence: 13-0748-1 - 3-prime edge 
    TTTAAAACGG NAGAGGTATT TTACTGACCG TTACCGACCG TTTTCATCCT 
    TTGCAATGTA CAGAGCCAGT ATNTCCTAAG TCCTGAGATT GTGATTGTTG 
    TATACATCAG CTAAAGCCTG ATCGAGGAGA CGATGCAGAG GTCGATTTCG 
    GTCACAATTG CATCGACAGT CAGTAATAGC CACTAATGGA CAAGTGGTGT 
    TTACCTGGTT AATTAGGAAC ATTTTCTCCA CCTTTCTCAT AGTTCTTGCT 
    TGTGAAGAAT AAGTGATTTT TTATTTTTTT TCACGAGAAT GTTATCTTTA 
    TTATTGATTC AAACAAGCT

AT1G63730.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G63740.1); Has 17590 Blast hits to 13527 proteins in 497 species: Archae - 17; Bacteria - 935; Metazoa - 1465; Fungi - 25; Plants - 14797; Viruses - 0; Other Eukaryotes - 351 (source: NCBI BLink).
Link
InterPro Scan - TAIR