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13-0817-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24442525 [Map]; Strand: w
      • AT5G60760.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 238; Region: intergenic
      • AT5G60770.1 - [+] show detail - nitrate transporter 2.4
        Distance: -1871; Region: intergenic
    Flanking Genome Sequence: 13-0817-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CGTTGGACCA CTACTTTAGT CTTATAGACA
    CGTACGATTC ACATTTTGGT ACATATACAA TCANNAANNN AGGGCGTGGA
    GCANCNTTGC NNGNCTGCAT GGCAGTCGGT AACTAGCATG TTGCTAACTA
    TAGTTGACAA TCCTAAGATT CTTTTTAAAG TTTTTGGCTT CTTCGTTTCT
    TCAGAAATTA CTTTCAAATG ATCTTCAAAA TTCATCATTC CACAATATGT
    ACATACGAAA TAAGTTATGG AATAGATATT TATCTTAATG AAGATTTCTC
    TTTTAAAAAA AAAACTAAAG CNCAAAAGNG CTAACTANAA AAAAGTTNTC
    GTTCACAAAA CATAAAAGTC ATTAACTCAT TACAAATTAA AAATAANGGA
    CTTAATNTAA NGTTAANGGN AAAAAANATC AAACAATANC CCNGTNGCAC
    GTTTCCTNNG GAGTTTNTTA NGGACAAAAA AGGTTTTTNT TTGNGAAGGN
    CCAACNGGNA TNGNNGNACA ATCTTCCTAA GCATAATTNG GGATCNGATT
    ACATCATCNC ANCTTTNGNT TAATAANGGG AAAATCCATA TNTNATTNGG
    GNGANTTGNA ATAACATTCT NTTTTTTTAN CCNAAAAAAA AANNNTTTTN
    NNNGGGGGNC NTNNGAANCC NNNNAAAAAA NNNNNNNCNT TNAAGNAAAG
    NAGGACCCCC NCNNTNNNNN NNAAGG

AT5G60760.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45090.1); Has 1216 Blast hits to 969 proteins in 195 species: Archae - 93; Bacteria - 85; Metazoa - 220; Fungi - 67; Plants - 127; Viruses - 43; Other Eukaryotes - 581 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60770.1

Model type
Protein coding
Short Description
nitrate transporter 2.4
Curator Summary
member of High affinity nitrate transporter family
Computational Description
nitrate transporter 2.4 (NRT2.4); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR