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13-0868-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3786552 [Map]; Strand: w
      • AT1G11270.2 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G11270.3 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G11270.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-0868-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATACTA GCAGCAATTT CACCACACTA GAGCAATGTC
    TTTTCAAAGC CAAACTGGAG CCATCTCTCT CTCTTTCCGA TCCAACAACA
    CTCGAGCAAT CTCTTTTCAA CATTGTCTTC TTGTCTCTAT CTCTCTAATT
    GATTGATCAA CAGACAATTT ATATATATAT ATATATATAC ACACACACGN
    GAGGAGCGCN GAGAGAANAN AAAACACACN CNCCGNGAAN ATATATATAN
    ANANATTATA CNGGGGGAGA AGCCCCTCNA NAAGAGNAGA NNANANACNC
    NNGAGAGCGN NATNTNTNNN TCTNCNCNNA NAAAANNNTN TTTTATACTA
    TATGAGNGCG NNNNTGTANN CNCTCNCNGG GGGGGGAGAG AGNGGNAGAT
    ANTNTCTTNG GNNACACANA AAANGAGANA GAGATANNCG NGCCCTCTGT
    GNNNCNCNCT CTNTTTTNNG GGGGCTNAAN NCACACNATT NTTTTTGTGT
    GACANANAAA ANANAAANGN GCNTACACNN GGGCCAAAAA AAAAAAAAAA
    ANCNCCNNTT NTTTTGAGAN GNGANAAAAA AAAAAAANNG GNGGNGGNAA
    ATTTTTTTTN CNNCNNAAAG GGNNTTCNNC NCAAAGGGGN GGGGGAAAAA
    AAAGGCGGNN GNGNCAANAA AAANTATTNG NGNNNNGNNA CAAATTTTTT
    TNNGGGGGGG NGNANTG

AT1G11270.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 1191 Blast hits to 1176 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1189; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.2

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G11270.3

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G34280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR