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Mutant Lines
13-0871-1

13-0871-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 4021840 [Map]; Strand: c
  - AT1G11910.1 - [+] show detail - aspartic proteinase A1
    Distance: -857; Region: promoter
  - AT1G11915.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 13-0871-1 - 5-prime edge
```
GTTGGGATGA TGTTGTTGAT GATTGAAGAA GGATGGTCAT GAGAAGGGAG 
AAGAAGATAA AGTAAGAGTG AAGTGGAGAC ATTGTTCAAA AATTAGGAGT 
TTAGATTTGA TTATTGGGTA GTTTTTAGTT ATGAAATTAT AATCTGGTGG 
TGTAAAGTGA TGAGTAAGCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 4021956 [Map]; Strand: c
- AT1G11910.1 - [+] show detail - aspartic proteinase A1
  Distance: -973; Region: promoter
- AT1G11915.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: 0; Region: exon1 (CDS)

ATCCCAATCA AATCTCTGCA GATCTTCTTG CGGCAACATT CCGATAAATT 
ACCCTTTTTC CATCGACGAC GGTTGTGGTA GCCCTTATTA CAGACACATG 
CTCATTTGCT CCGACAACGA TACCAAGCTC GAACTTAGAA CACCATCTGG 
TAAATACCCT GTTAAATCCA TAAGCTACTC TGATCCTCAC CTTCTTGTTT 
CCGATCCATT CATGTGGAAC TGTCAAGATC GAGACAATTT TCGACCAACT 
AGATCTTTTA GCATCGATTC AAGCACACAC TTCACTGTCT CTCCTCAAAA 
CGACTACTTG TTCTTCAACT GCAACACCGA TAAAGTTATC GTCGAGCCAA 
AACCGCTCTT CTGCGAAAGG TTTCCAGATA GATGTGACTC GTCCTGCGAT 
AGTTCTAGCT ATCTATGCAG ACATTTGCCT GAATGTGGCT CTGCTTTGGG 
ATC

AT1G11910.1

Model type: Protein coding
Short Description: aspartic proteinase A1
Curator Summary: Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).
Computational Description: aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11915.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR