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13-0886-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 73643 [Map]; Strand: w
      • AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
        Distance: 0; Region: exon7 (CDS)
      • AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 13-0886-1 - 5-prime edge 
    ATTCTAGTAT TGGGTGACCC ACTACAATAT CAGGTGTATA ACCAGCTGCA 
    CCTCTCACCA ATCGAGGCTT CTTTGATAAT CTCTCCTCTC CTGTGCTCTC 
    ATCNGGAGAC CCAATGTTAC ACCCTGAGTC TGGTGTTAAA GGCTCCCGGT 
    AAGATGAGAG AGACTCGTCA ACTGAGAGAC TTTTGTCTGG TCCACAGTCC 
    TTGCCAGACT TGTCTTGAAG AGGAGACTCA GATGTTGGGG CAGGGGTTGC 
    AGGATCTGAA TCGCCCGTTA CTGGGGCTGA GGGTTCGCCG AGTACTCCAC 
    TGAGTCGTTG TTGCTCTTCA ATTATCTTCT TCAAGTACTT TCCTTGTGCT 
    TCTATCCGTA GTTGCAGCTG TCTTTGCACC TAAGAAAAAA TCACATCAAA 
    GAATAATGTC ATATGTAATG CAAAATTCAG TGCTACACTG AAAATCCTAC 
    TAATTGTTTC GTTGTTGCTT GTCTTTCTTA AGTAGGAATG GTGAAGCATA 
    CTTCTAGTTG CTCGTGTAAT CGTTTCTGAA CTTCCATCTG CAACTTGAGG 
    GCTTCAGTTA TCTGCATTCC CCTGTAATCT CGAAACGATA TTGATCACTT 
    AATCTGCGGC GCGAGGTAAT ATATATATAG CATCACAAAT CAAGCTCAAA 
    GAGGGAAATT TCACGTACGA CGAGCCGTCC A

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 73568 [Map]; Strand: w
      • AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
        Distance: 0; Region: exon7 (CDS)
      • AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 13-0886-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    NNGCTTGAAC ACTTCTTACC ATCAGTCAGA CCATGTCCTC GCCTTTGACC 
    AGCCATCTAC ATCACTGCTT GGGGCCGAAG AACAGTTGGA TAAGGTTTCA 
    GGAGATAATC TTTGAGTTGT TGAGTGTACC ACATGTAGTG TTGTTTATCC 
    TAATCCTTAT TAGTTAGGAG TTTCCTCTAA TAATGTGATC ACAAGTCGTT 
    AATTCTCTAG GCACTATCAC GAGCATGAAG AATGAATATG TCTGTGTTGT 
    GCTGTAATTT GGTAAACACA AAACAAAATT ACTCTTATTC CCAACACACT 
    ACATTCTTCT AAAGCT

AT2G01060.1

Model type
Protein coding
Short Description
myb-like HTH transcriptional regulator family protein
Computational Description
myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01060.2

Model type
Protein coding
Short Description
myb-like HTH transcriptional regulator family protein
Computational Description
myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR