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Mutant Lines
13-0923-1

13-0923-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 2763099 [Map]; Strand: c
  - AT1G08680.4 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
    Distance: 0; Region: intron1 (CDS)
  - AT1G08680.1 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
    Distance: 0; Region: intron1 (CDS)
  - AT1G08680.2 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
    Distance: 0; Region: intron1 (CDS)
  - AT1G08680.3 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 13-0923-1 - 5-prime edge
```
GGGATAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCAC AAACACAAGC CCCCCAAAAA AAACATATCT 
TTCACAAGAT TATAGAAATC ATAATCACAG AAGCTGAAAC CCATCAGTTC 
AAAACTCAGT TGATACACTC ACAGGAACAA TTTAGAGAAC AAATTAAGCC 
TTTGAAGGAA GACAAAAATT GGTAAAAGGG AGAGAGAGTT AGATAAAATT 
ACAAGGCTAT TGCAGTTGAT ACAACGACGA TTCGGNGGAA GCT
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 2763192 [Map]; Strand: c
- AT1G08680.4 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
  Distance: 0; Region: intron1 (CDS)
- AT1G08680.1 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
  Distance: 0; Region: intron1 (CDS)
- AT1G08680.2 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
  Distance: 0; Region: intron1 (CDS)
- AT1G08680.3 - [+] show detail - ARF GAP-like zinc finger-containing protein ZIGA4
  Distance: 0; Region: intron1 (CDS)

TCAGTAGAAG TTCNTCTNCT NNGCCNNGTA ATAGGTCTAT NTCCACGATC 
NAGANNTGGN NAGAGANNCN CCCNGNGCTA CAATTTTTCG TTCATTTGTG 
TGAATTTGGA TTTAATTCCA TTCTGGCTAT ATTATAGTAA GACTTGCAAA 
TGATGCAGGG CCCTCAATAT GTTTGCACAA CTTTCTGGAC CTTCGTATGC 
ATGGCTTGTA GCGGGATACA GTGAGTACCT TCCCCTTCCT ATATACTTTC 
TTTGCAACTA TTCCTGACCT CTCTGTGTTC CTTCCTTGTC AGTATCGTAC 
GCTGGTTTGT GTTATCTTTT CTCTTTCCAT GATTTACTTT ATCATCTTAC 
ATCTTACATT TACAGTTAAG TTATATGTAA TTTGTAAAGT AGGAATAAGT 
AACCTTTTTG TTAACGGTTT CCTATGTTCA TCCCACGATT AAGTTTTCTG 
CTATATTGTA AGCTATCGAG TCTAAATTAG TTTAAATATT TGTAGACAGG 
ACTCATTGTG ATCCCCCANA AGCATGGCTA ATGCATTGTC TTACAAAATA 
TACATTTATA TCTAGTGTTT GATTGTTTTT GTGGGCTNTA GNTNTTGTTN 
ATGCACCTGA TTTCNTCNAC AGATTGGGGG AGCTGATTTT TTGGCATCNT 
TGNATTTGGN GGCTGNCTNA TACCCTNNAT TNTATTACNC TGGNCCG

AT1G08680.1

Model type: Protein coding
Short Description: ARF GAP-like zinc finger-containing protein ZIGA4
Curator Summary: A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.
Computational Description: ARF GAP-like zinc finger-containing protein ZIGA4 (ZIGA4); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2); Has 3488 Blast hits to 2959 proteins in 240 species: Archae - 0; Bacteria - 4; Metazoa - 1486; Fungi - 545; Plants - 477; Viruses - 2; Other Eukaryotes - 974 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08680.2

Model type: Protein coding
Short Description: ARF GAP-like zinc finger-containing protein ZIGA4
Curator Summary: A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.
Computational Description: ARF GAP-like zinc finger-containing protein ZIGA4 (ZIGA4); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2); Has 3491 Blast hits to 2950 proteins in 241 species: Archae - 0; Bacteria - 7; Metazoa - 1485; Fungi - 538; Plants - 477; Viruses - 2; Other Eukaryotes - 982 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08680.3

Model type: Protein coding
Short Description: ARF GAP-like zinc finger-containing protein ZIGA4
Curator Summary: A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.
Computational Description: ARF GAP-like zinc finger-containing protein ZIGA4 (ZIGA4); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08680.4

Model type: Protein coding
Short Description: ARF GAP-like zinc finger-containing protein ZIGA4
Curator Summary: A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.
Computational Description: ARF GAP-like zinc finger-containing protein ZIGA4 (ZIGA4); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: NSP (nuclear shuttle protein)-interacting GTPase (TAIR:AT4G13350.2).
Link: InterPro Scan - TAIR