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13-0951-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3397645 [Map]; Strand: c
      • AT1G10360.1 - [+] show detail - glutathione S-transferase TAU 18
        Distance: -796; Region: promoter
      • AT1G10370.1 - [+] show detail - Glutathione S-transferase family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-0951-1 - 5-prime edge
    NGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAC ATGAATGAAG TGGTTTGTCG CTCTAAGAGG
    TTTCCTAAAA GCCGGAGGAG AAGAAGAGAA GAAAGCTGTG ATAGCTCAAC
    TAGAAGAAGG GAATGCGTTT CTGGAGAAGG CGTTCATTGA TTGCAGCAAA
    GGAAAACCGT TCTTCAACGG TGACAACATC GGTTACCTCG ACATTGCTCT
    CGGGTGCTTC TTGGCTTGGT TGAGAGTCAC CGAGTTAGCA GTCAGCTATA
    AAATTCTTGA TGAGGCCAAG ACACCTTCTT TGTCCAAATG GGCTGAGAAT
    TTCTGTAATG ATCCCGCTGT AAAACCTGTC ATGCCCGAGA CTGCAAAGCT

AT1G10360.1

Model type
Protein coding
Short Description
glutathione S-transferase TAU 18
Curator Summary
Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
Computational Description
glutathione S-transferase TAU 18 (GSTU18); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT1G10370.1); Has 5056 Blast hits to 5041 proteins in 1030 species: Archae - 0; Bacteria - 2429; Metazoa - 208; Fungi - 116; Plants - 1907; Viruses - 0; Other Eukaryotes - 396 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G10370.1

Model type
Protein coding
Short Description
Glutathione S-transferase family protein
Computational Description
EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: response to water deprivation, response to karrikin, toxin catabolic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 18 (TAIR:AT1G10360.1); Has 6064 Blast hits to 6029 proteins in 1096 species: Archae - 0; Bacteria - 2896; Metazoa - 397; Fungi - 130; Plants - 2065; Viruses - 0; Other Eukaryotes - 576 (source: NCBI BLink).
Link
InterPro Scan - TAIR