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13-0969-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3733216 [Map]; Strand: c
      • AT1G11160.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-0969-1 - 5-prime edge
    CGNGATAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACNGGCAT 
    CGTGCCATCC TNCTTTCATT CNTGCGGGTN NCATTCCANG CNTNCCANGA
    GNNNNCAAAG ANANGAAGAG ATNNNATAGA AGNGAGCNGG NACNGANCNC
    GACGNAGCAA TAANAGAGAC AGAANATAAG AAAAAAGTAA AGCAGACGGA
    ATTTTTCGGT CCTTTTTCTC AGGATTCTGT CATTTTCAAT TCTTTATTAA
    AAAAAAACAC ACATTTCCGG TTGTTATGTT TTATTTTATT TTGTTTATTT
    ATGTCATTGA TGATGANAAT AATACACACA CAAATCGTTG AAAACTTCAN
    AATATTGGAC CCTCGTCGTT ACTTTTTNTG ACNAAAATAC CCTTCCTTTT
    CTACTATTTT CGNGTACACG TATAAATCAA CCTAAATATA AATATAGCAC
    TCACAAGTCA CAACTAACGG ATTACAAATT TAAAATATTG TTTTTTTTTT
    TTTTGGGGGG TTAAAAAANT TNTTTTTTTT NGGGGGGGGN CCCNGGGGGG
    GNAAAAAAAA AANAANNTTA AAAAGNNNTT T

AT1G11160.1

Model type
Protein coding
Short Description
Transducin/WD40 repeat-like superfamily protein
Computational Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G61210.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR