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13-0979-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13816623 [Map]; Strand: c
      • AT2G32540.1 - [+] show detail - cellulose synthase-like B4
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 13-0979-1 - 5-prime edge 
    ATACTGAGGT CCTTGGATTC CCGCAATTCC TCGTCCCAAG TACTAGTTAA 
    TTTTTTAATA AATAAAAGGA ACTAAGATTA AGTACGGATT GGTATAACAA 
    ATATAAATCA TCGAGCTTGA CNTGAAATTT ATTATATTAA CATTAGAAAT 
    AAACCAAAGA AAAAGTAAAG AGATAAATCT TACTAATTGT AAGACGGTGA 
    GTTCACCGAC ATTAGAATCA TAGAAATCTT GAGGGTATTG AACAAAAGCA 
    CAATGGTTTG AATCCATTGA TTTTTGCAGA AATATACACA TTGCTTGTCG 
    CACCACATCT GCTTCATTGA CATACATGTC GCAGTCTACG TTCAACATGT 
    ATGGTGCATT TGTCATCAAC CCTGACACTC TTACCTGTTC AAATTCATCT 
    CAGGCTCCGT CATCATGTTC TAAATTACTA TAACAAACCA CATAAACTGA 
    GATATACAAT CATTGATATA TAGTTGTTCA ATATGGCTTT ACCATATATG 
    ATGCCTTAGG CTAAATTAGT CTATGGTGGC TCATTATTAA ATATCAATTT 
    CAAAGGCACC ATGAGTGTTG TTGCACTGGT TTTGCCTTCC TTGAAAAGAC 
    GTATACATGC ATTATGACAT TATGCACCTC TATATGTCCA AGCTCATAAT 
    TCTTATGTAC TTTACTTGAA ACTTAAAAAA AAAAAAAAAA AAAAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13816739 [Map]; Strand: c
      • AT2G32540.1 - [+] show detail - cellulose synthase-like B4
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 13-0979-1 - 3-prime edge 
    CTCAGTATGC GGGTTCAGGA TGCTTCCATA CTAGAAGAGT TATGTACGGT 
    CTTTCTCTAG ACGATTTAGG AGACGATGGA AGTCTTTCTT CAATTGCTAC 
    AAGTAAGTAC AACCAACAAA GACATAAAAA AACCAATCTT TTAGCATGCA 
    AAATTCTGAT GTTTTCATTA ATTATACTAA CATTTTTGTT ATTCCATCGT 
    TCTACTATTC ACATGTCAAA TCATTCACGG TTCTCGTTGT AATTTCATTA 
    AGGGAAGTAT TTAGCTGAGG AGAGTCTAAC GAGAGAATTT GGGAATT

AT2G32540.1

Model type
Protein coding
Short Description
cellulose synthase-like B4
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like B4 (CSLB04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2375 Blast hits to 2288 proteins in 474 species: Archae - 7; Bacteria - 756; Metazoa - 0; Fungi - 5; Plants - 1590; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link
InterPro Scan - TAIR