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13-1034-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15954228 [Map]; Strand: c
      • AT4G33070.1 - [+] show detail - Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1034-1 - 5-prime edge 
    NGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TGATTATGGC ACTAACCGGA TTCTTCATCA CACCATTGGA 
    TTACCTGATT TTAGCCAAGA GCTTAGGTGC TTCCAAACGG TGACTTGTTA 
    TCAGGTAATC ACAAAAAATC AGATCTAATT AGAAATATTT TGAAGATTAA 
    TTAGCGTCGG ATTATGAATG ATTTTGGTTC TGTTTTTGTT TCTCAGGCGG 
    NGGNGAACAA TTTANATGAT GCTCATGAAC AGATTGATAA AGCNATATCA 
    ACNGCTTTGA AANAAANCAA GCCTGNGTNT NTNANTGNAA NCNGNAACTT 
    AACNNCGANT CCNCATNATN CNTTTAACCN GGNANCNNNN CCNTTTTTTT 
    TTTCNCCCNN GGGANTTNTN NNTNAANCCN NNANAAAANN NNNGTTTTNG 
    GGGAAANNAA ANCNCCNAAA GGGNNTTTTT TNAATTGNCC NCNNAAAAGG 
    GNTTNAAANC NNCGGGGGGG GNCNACNTTG GNNNTTNTNA ATAAGGGNNN 
    AAAACCNNNN TNGGNNGGGG GGNCCNNNAN NNNNNNNGNG GGNNANNNNN 
    NNA

AT4G33070.1

Model type
Protein coding
Short Description
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Computational Description
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; FUNCTIONS IN: in 6 functions; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: TPP-binding enzyme, conserved site (InterPro:IPR000399), Thiamine pyrophosphate enzyme, central domain (InterPro:IPR012000), Pyruvate decarboxylase/indolepyruvate decarboxylase (InterPro:IPR012110), Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (InterPro:IPR012001), Thiamine pyrophosphate enzyme, C-terminal TPP-binding (InterPro:IPR011766); BEST Arabidopsis thaliana protein match is: Thiamine pyrophosphate dependent pyruvate decarboxylase family protein (TAIR:AT5G01320.1); Has 20589 Blast hits to 20526 proteins in 2548 species: Archae - 428; Bacteria - 13367; Metazoa - 177; Fungi - 761; Plants - 551; Viruses - 4; Other Eukaryotes - 5301 (source: NCBI BLink).
Link
InterPro Scan - TAIR