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13-1088-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24067923 [Map]; Strand: w
      • AT5G59732.1 - [+] show detail - other RNA
        Distance: 1769; Region: intergenic
      • AT5G59740.1 - [+] show detail - UDP-N-acetylglucosamine (UAA) transporter family
        Distance: 2128; Region: intergenic
    Flanking Genome Sequence: 13-1088-1 - 5-prime edge 
    CCACTCATGC AATTCAAATG GTCCTCATTC TCCATGGCCC CTAGGGATTT 
    CGACTAGACA GGAGACGACC CACTTGTTCT CTTTTTAGAG CACTTAGTTT 
    TTGTTTTCTT TTATGTTTGG TCCGAGTAAA TCATATAAAA TTAAGAATTT 
    GACCTTACTA AGTTTGACCG CTTTATTTAC GGGTCTATCC AAATAACCTG 
    TTTAAATATA TATAGATAGA TAGTCCATCA ACGACTACTT TGTTAATAGT 
    CTCATAATAG TTCATTTCTT TCGTTAGCAA AAACAGTTGA TATCATACAT 
    AATCGGTATT CTATGTGAGA TGTTAGCTCT GTTCTCATGA ACTGATAAGA 
    GTGTTTTGTT GTAGAAGTTT TGATCTTGTA CCAATTCCAA TGAAACCCAA 
    AAGAAAAACT GATAGAGTTT GATATAATCG GGGTTTGAGC TGAAGTTGGC 
    AGCATAATCA GATTGGTTAT ATGTTAATTT AGCTGGTTTA AAGAGGATTT 
    TTTTTAACTC AGATCGAGGC AAAATGCTGG CCAAACTTTC AGTTTGACGA 
    CACTATACAA CCATATTCCA TTGAATT

AT5G59732.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT5G59730
Link
InterPro Scan - TAIR

AT5G59740.1

Model type
Protein coding
Short Description
UDP-N-acetylglucosamine (UAA) transporter family
Computational Description
UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR