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13-1120-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10025089 [Map]; Strand: w
      • AT5G28010.1 - [+] show detail - Polyketide cyclase/dehydrase and lipid transport superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 13-1120-1 - 5-prime edge 
    ATTGGAACTA CGTTCATGGT AATTTATATG ACTTCGAAAA TATTTTTTGA 
    ATATAGAAGA TTTGATTGGT GAATGTTTTG GTTGTAGAGG GACAAGCAAA 
    GGTTGCAAAA GAGAGGATTG AATTAGTAGA GCCAGAGAAG AAACTGATCA 
    AGTTTAGGGT CATTGAAGGA GATGTTATGG CTGAGTACAA GAGTTTCTTG 
    ATCACGATTC AGGTGACCCC GAAGGAAGGA GGGACTGGAA GTGTTGTGAA 
    ATGGCACATT GAGTATGAGA AGATTGATGA GAACGTGCCT CACCCTGAGA 
    ATCTTCTCCC TTTCTTCGCT GAGATG

AT5G28010.1

Model type
Protein coding
Short Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Computational Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT5G28000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR