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13-1146-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4167485 [Map]; Strand: c
      • AT5G13130.2 - [+] show detail - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G13130.1 - [+] show detail - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 13-1146-1 - 5-prime edge 
    GATAAAACTA ACAAAATCGG TTATACGATA ACGGTCGGTA CGGGATTTTC 
    CCATCCTACT TTCATCGTCG CATCCCACCT CCATTGTCTT CAACTATAAG 
    AATGCTGCTT TTTCCGTCTC TTTTATTTAT TGTCGAATCA ACATGAACAT 
    ATGTAGCCCC ATTACTTACC TGTGTTGCAA ATTTATCAAA CATAAACTTA 
    TGTTATACAA AACTTGATTT CAAAATCTAT AAATTTGCGA AAACAAGTTG 
    ACCAAGAAAG ACTATTTCTT GCTAAAAGAA AAAAATTATC AATGTTTTGA 
    ATAAAGATGA AATATATACA AACCTCGTCA AGAGAATTGT CTAGAAGTTC 
    AGCTAAAGCT CCAAGAGCCC ATTTGTGGCT TGTGGCGTTT GCATGAAGAA 
    ATTGAGGATG AACCCTAACC GCCGCATCAT TGCTACCTAC TTGCATGCAA 
    CACACAAATT AGGGTTTCGA ATCCCAAGAA AGATC

AT5G13130.1

Model type
Protein coding
Short Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Computational Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G13130.2

Model type
Protein coding
Short Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Computational Description
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1).
Link
InterPro Scan - TAIR