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13-1166-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14875950 [Map]; Strand: c
      • AT4G30410.2 - [+] show detail - sequence-specific DNA binding transcription factors
        Distance: -3774; Region: intergenic
      • AT4G30420.1 - [+] show detail - nodulin MtN21 /EamA-like transporter family protein
        Distance: -1119; Region: intergenic
    Flanking Genome Sequence: 13-1166-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTG TCTACGCCAT TCAAGAAAAC TACAGCTTCT 
    TTCTGTTAAT GTAAATTTGA TTAACTACAG CTTCTTTTTG TTAATGTTCG 
    AGGTTAAAAT CAAAATTTTG GATCTTAGTA CAAGAGATCT GATAATCTTA 
    ACATGACAGC TCTTTCCACA CTTGGTCTTA GTACAGACAA GTGAGTCCAT 
    GAGTTAGCAC TAATTTCTTG TTTTAAATTA ATTGTATATT TGTTTGATCA 
    ATTTATATTA GTTGTAGTGC AGGTATTTAT TTAATATTAT CGATCTAATA 
    AGAATATCTG CTACTACAGA TCTAGAAGAT GAACTAAAAT AACACTCTAA 
    TGCAATCGTA ATGCTTCACC CCAAATGGCC GTTCAATTAA TATATTTCTC 
    AACCTTCGTT TTTTGTTAAA TTTGGTGAAA ACAATTATCA ACGACACTAA 
    TATCATTGTA TAATTTTCAA TTAACACACT TCCTCTTTGT CAAAATAGAC 
    GATATTTAGC TAGAACTTCA TCGTTTCACA TTGATCATTT CTTGGTGCAG 
    AGAGGGAGTC TTAAACAACA TTATGAGAGA TGTTAATTAG AGTCTTCTTT 
    TCTAGCTCCT GATTTCAAAT GCAGAAAACC AAAAGGGAAA AATCAGCCAT 
    GTGTTTGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 63140 [Map]; Strand: w
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -270; Region: promoter
    Flanking Genome Sequence: 13-1166-1 - 3-prime edge 
    CTNCCGTTCC CACCGTTTTA TCCCTACTCA CAATATTATG CATANCCCTA 
    TTACANAGAT GATCAGTGTT TACATACANC TATNAAGCTT TNTCATCCTC 
    ATTTAGTCTC ATTGTATCAC CATTCATGAA TT

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G30410.2

Model type
Protein coding
Short Description
sequence-specific DNA binding transcription factors
Computational Description
sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G30420.1

Model type
Protein coding
Short Description
nodulin MtN21 /EamA-like transporter family protein
Computational Description
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G28040.5); Has 3568 Blast hits to 3558 proteins in 670 species: Archae - 22; Bacteria - 1633; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 691 (source: NCBI BLink).
Link
InterPro Scan - TAIR