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Mutant Lines
13-1170-1

13-1170-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 2646058 [Map]; Strand: c
- AT1G08400.1 - [+] show detail - RINT-1 / TIP-1 family
  Distance: -23; Region: promoter
- AT1G08410.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -131; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATTAGA CTCAGAGGAC ACGAAGGCTT TAGAAAACAA 
AAGGAACAAC CTTTTTCCCG GCAAATGCTT CCGATGGAAC ATCCACTTCC 
ACTGTCGTTC GTCTTGCCAA ACCCGGCCAC CCTTCCCGGT CTCGCACTAG 
GCTTTATTGA CGGTAATTTC GTAGACCTCC AAGATCTGCT CCTCCGCGCT 
TCGACTCTGA CGTCCAATTT AAACCACGAC TGTTCTGATC TAAACGACCG 
TCTTCTCCAT CTCCGGACGG ATCTCACGAA GCACGCCGTT TCCTGGATCT 
CAACCTCACT TTCCGCTAAA GTTTCACTCG AAGATTTGAG ATTGAACCTG 
GAGAGCCTCC TCTGTCTCCG TAAGTTACCA AACCCTCGTG TTTTATTTTT 
GGTGACGTAA AGATATTGAG TTTTCTTATT GTCTCCAATT TTTCATTGTA 
GCTACGGATT CTGTCGGAAA GCAAACGAAT TGGGAGTTAC AGCAAGTCGT 
AGAGGAATTG TGTCGTATAC AGAATCGGCG TAAATATTTC GGTGAGTTTG 
ACTCGATTTT TGATTCTTGA ACATTATCAT CAAGAGCTAG CTAAGAAAGA 
TTCAATTTTT CAGTGACTGC CTTAAAGTTG GAAAGTCTTG TTGGCGATCT 
TGAAGATTCT GTGTTTCATC CGATAAGTAA ACGCAAAGGA AGTACGCTTC 
AAGTAAAGCT

3 prime edge [+] show sequence

Chromosome: 1; Position: 2646078 [Map]; Strand: c
- AT1G08400.1 - [+] show detail - RINT-1 / TIP-1 family
  Distance: -43; Region: promoter
- AT1G08410.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -111; Region: promoter

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCTTAT 
GTTATGATTT TTGATTTCCC TTAAGTTTAA CTAAAAATTA GTATTTACTT 
TGAAGAAAAT AAAAAGTAAA AAAAATCGCT TTGATAAAAA AATTTAGCTT 
CTCCGTGCAG CGAGTGTAGT CGGCGGCTGA CNGTTTTCTT TACCCTAACA 
CTTTTGAAGC AACATAACAA ACGCGCCGTC GAATCCATTT TTAAGGGTTT 
AGAGACTTTT AGGGTTTACT TGAGAACAGA GAGATGGGGA AGAGCGAAAA 
GACGTCGTTG GGGCGATCAC TCGTGAAGCA CCACAACCAT ATGATACAAG 
AATCCAAAGA CAAAGGCAAG TACTACAAGA ATCTACAGAA GAAAGTTCTC 
GAATCTGTGA CTGAGGTCAG TGACATCGAC GCCATCATTG AGCAAGCTGA 
GGAGGCAGAG CGTCTTTACA CCATTAATCA CAGCTCCTCC ACACCTTTGT 
CTATCAATCT GTATGCTTCT CTTCTTCTAA ATTCCTCTTT TTTATTGTCC 
TTTGATTGAT TAGGTATTTG NGGTTCTGTT TGTATAAATT TAATATGGTA 
ATGAGATTAA AGAACAATTA CATGTCCTCT TGATGTTCTT ATGGTGTGCT 
GTTTCTCTAA TGTTTTTGGT GAAACAGAGA CACAAATTCT AGCTCAAGTG 
TTATAGCAGC TGAAGAATGG AGAGAGCAAC AGAAGATAGA GGAGGCTTTA 
CACGCCAGTA GTCTTCAAGT ACCTCGAA

AT1G08400.1

Model type: Protein coding
Short Description: RINT-1 / TIP-1 family
Computational Description: RINT-1 / TIP-1 family; CONTAINS InterPro DOMAIN/s: RINT-1/TIP-1 (InterPro:IPR007528); BEST Arabidopsis thaliana protein match is: RINT-1 / TIP-1 family (TAIR:AT3G47700.1); Has 146 Blast hits to 144 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 64; Fungi - 34; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G08410.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G27200.1); Has 7267 Blast hits to 7158 proteins in 1932 species: Archae - 109; Bacteria - 4700; Metazoa - 622; Fungi - 502; Plants - 285; Viruses - 0; Other Eukaryotes - 1049 (source: NCBI BLink).
Link: InterPro Scan - TAIR