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13-1171-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 172768 [Map]; Strand: c
      • AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1171-1 - 5-prime edge 
    NACAAAGCTA CCGGCCGGGN CCGCCGANCA NGCGTGCTCT ATNCCCACAA 
    CCTCATTGCT CCATCCACAT CACCGGAGCT TGAAACCCAG TGAATCAGCG 
    ATGTATAAGT CACCGTATCG ATCAACACAC CCTTCTCCTT CATAAGGTGA 
    AAAACAGAGT ACATGGATTG AATCCGACCG GCTTCTCCGA AGATATCGAG 
    CATGGTGGTA TAAGTGAAGT GGTCGTGTTT GAAACCCTTG ATTTGAGCAG 
    CCCAGTTGAA AAAGAGCCAA GCT

AT2G01390.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR