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13-1187-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2957186 [Map]; Strand: w
      • AT1G09170.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon18 (CDS)
    Flanking Genome Sequence: 13-1187-1 - 5-prime edge 
    NGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CTTTCCCATC TCTCGGCGGG GTTTTCCATG 
    ACGGTGAACC TACTAGTCCT TGTAAGTCAA GGCTAGATGC AGAGTCACTT 
    TGACCCTGCA AGTAATTTCA CTACACATCA TGAAGTAATC ACNTGCAAAA 
    CGTATTAACA AGTTTGATTT GTTTTGTTTG GTGAATGAGT TTTCTTGTCC 
    CCTTTACCTC AATGCTGTTG ACATCATCAA TCTGTGATGG CTTATGTTTG 
    GTTTGGACCT GTCTTGTACT GTTTGCTGAT TTTGAAAATG AAGACGAAAC 
    GCCAAGTGAC TTTTTTCTGA GGAGTTTATC AGGAGTAAGG GGTCTTTGGA 
    GCTGTGTTTG ATCTGCCCCG CTCTCCTTTC TCGCTAGCGC AAGTTTCAAA 
    CTAGCAATCT GAAAGCAAAT AACAAAGGTA ACTGATGATT TGGACAATGT 
    ATTTTGAGAG AATGAATAGT ATAATAATGT GAAGAGAAGT ATATATGGTG 
    GACCTGTTCT TTGAGTTCTT TAACCTCAGA AGTGTCCTTA TTGACACGAG 
    CAGCACCGAG GTCAACAGTG GCCACCCTCT CTGCAAATTT CAGGGTGCTG 
    AGTGTTTCTC CCAAATCTTC TAGTTCAGGG CTAATGTGAA TAAACATGAG 
    CGTTTTCGCT TGTCCTCCTG CACACACACA TACATGCATA CATTGNANAA 
    CCATATGTTN TACTTCAAAT GGAAACCCGN NTANCAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2957180 [Map]; Strand: w
      • AT1G09170.1 - [+] show detail - P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calpon...
        Distance: 0; Region: exon18 (CDS)
    Flanking Genome Sequence: 13-1187-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAAG 
    GAGGACATGG AATTTATTAT ACCAGGAAGT GAATGGGTTG ATAAACACGA 
    GGACGAAATC ACGCGTAGTA GCAAACCTGA AAACAGAGCA CATACACAGC 
    TTGAGAAGCG AACGTCTAGC TTGAAACGTG AAGCAACTCG A

AT1G09170.1

Model type
Protein coding
Short Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Computational Description
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: shoot, male gametophyte, root, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Calponin-homology (InterPro:IPR016146), Calponin-like actin-binding (InterPro:IPR001715), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 4 (TAIR:AT5G27000.1); Has 11983 Blast hits to 11146 proteins in 466 species: Archae - 0; Bacteria - 101; Metazoa - 5767; Fungi - 1479; Plants - 1905; Viruses - 0; Other Eukaryotes - 2731 (source: NCBI BLink).
Link
InterPro Scan - TAIR