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13-1224-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28078599 [Map]; Strand: w
      • AT1G74720.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (3UTR)
      • AT1G74730.1 - [+] show detail - Protein of unknown function (DUF1118)
        Distance: -258; Region: promoter
    Flanking Genome Sequence: 13-1224-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TTGAGACCTG TAATATTTTG AAGGAAACGA 
    GAGAGATTTC AGATTTGAGA GGTGAAAAAG GAAGCAAAAC TTGTCAGTAA 
    AGTTTTTTGA CCACAGATTT GCTTTTGGTA TCTCTGTAGT TTTCTCTGTA 
    ATCTAAAATG ATTTACTAAT TCCTCATTTA ACTTATTTTG TTTACGCCTA 
    AACTATTACA TGTAAACATT GTCTGATTAT ATAAATTCTA AGTGAAAAAC 
    CGGAGATAAA GCGCTAACGA AAATGATTGG TTGAAATCAC AAAGACATCA 
    TCTGACGTGG CAGTTTCTCT GTCTATCAGA GTTTCAGATA GTGTGCCAAC 
    GGCGAAACAA GACACGAAAG AATCTCTAAA GAAATCATTT TCATCGCTTC 
    GCTTCGATTT TTCTTCAATG GCTGTCGTCG GCGCTCCAAT ATCGTCTCCG 
    GCGGCTCAGC TGCAGACACA ATTTCTCTCC AATCCCATTC TCCCCCGCTT 
    TCGCCGGTCT TTCTCCACCG GAAAATCACC AGCAACTTTC TCCGTCGTAG 
    CTATGGCTCC CCAGAAAAAG GTAACTAACT CTCTTAATCA TCTCCTTTGT 
    TTAAGTTCTG AGATCTTTTG CACTTTCATC AATCACTTCA TAAAGTATAA 
    ATCTTTTTTG ATTCTCAAGA TAATCTTTAG AAACATGAAT AAGCAGTACA 
    TTTTAGTAAT GGAACAAAGA CATTGAAGTC TCTGTATATA GTATTGGTGC 
    A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28078598 [Map]; Strand: w
      • AT1G74720.1 - [+] show detail - C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
        Distance: 0; Region: exon1 (3UTR)
      • AT1G74730.1 - [+] show detail - Protein of unknown function (DUF1118)
        Distance: -259; Region: promoter
    Flanking Genome Sequence: 13-1224-1 - 3-prime edge 
    GAAAACGGNA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCTCT 
    CAAAGCTCAT GCCATCTGAT TACAGTTTCC GACAGAATCT GAATAATAAA 
    ATGAAGAATC ATAATAATAT GATAAAATTC TTAACCCATA ATGAATCTTT 
    TTATTCTATT TCCTCCTCAG CCCAAGAAAC TGTTGGATAC TCAAAAACAC 
    CTAACATTTA CTATCTTGAC ATCTTTCTCT CCTTAGATGA GTCGATCGGA 
    CAAGCT

AT1G74720.1

Model type
Protein coding
Short Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Curator Summary
Encodes a putative transmembrane protein carrying four C(2) domains, suggesting that QKY may function in membrane trafficking in a Ca(2+)-dependent fashion. Mutant analysis shows that this gene is involved in organ development.
Computational Description
QUIRKY (QKY); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: organ development; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT4G11610.1); Has 6147 Blast hits to 4985 proteins in 369 species: Archae - 2; Bacteria - 143; Metazoa - 2968; Fungi - 627; Plants - 1368; Viruses - 31; Other Eukaryotes - 1008 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G74730.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1118)
Computational Description
Protein of unknown function (DUF1118); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1118 (InterPro:IPR009500); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1118) (TAIR:AT5G08050.1); Has 78 Blast hits to 78 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR