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13-1313-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4708539 [Map]; Strand: w
      • AT1G13710.1 - [+] show detail - cytochrome P450, family 78, subfamily A, polypeptide 5
        Distance: -3882; Region: intergenic
      • AT1G13720.1 - [+] show detail - pre-tRNA
        Distance: -1096; Region: intergenic
    Flanking Genome Sequence: 13-1313-1 - 5-prime edge
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT CTCAACTAGC AAAAAGACTT CTAGTTCGGT
    TCAAACATAA CTAGAGTGAT CTCATTCTCT TGTCATCAAC TCTTCCCCTT
    GTTTGGTATA TGGCTAAGGA TATGGATTGG GAATTTCTTT TTTTATTAAA
    TCAAATATTT TCCTAACGAA AATTGCACAC NTGATATTCC ATTTGGATTT
    GGATATGGAT CTTTTTTTTC CCTCAAGATT GATATGGATC TATAAATATA
    TGCACCGAAA AAAAAAATNT NTNTAAATNT NTGCNCATNC NTGNGNCNAT
    GGANNANNTT TTTTTGGTTC NANAAAATTC CTTTTNATAN NTTTAANANC
    CAANGGNGGN NGCTTNCCNT NANCGGGGNG GNAAAAAAAN ACTTTNCNTN
    TANTNNCNTT TNCCANGNAN TNAAAAANNN NCTNGANCNT NCNTTTTCAA
    AAANTAAAAG GGGNNCCCAA TTTTAGGGAA ANAAAANCCN NNCCTTTACC
    TTTNAAATAA NCCAAANNAA TCCAACNNNG TNNNCGNGGN GAAAACATTT
    TTAAACTAAA NATTNNGGGN TNANAANCAA ACANCCNNNN CCNTTAAAAA
    AAAAAAATAA NNTCNAAAAA GTTTNGGGNA AAAATNTNTT GTTTTTGGNN
    NAGNANGNAC NGTNAAANTN ATTNNACNAN AANGGGNGGG GNCCCGTNTT
    TNTAAAAAAA ANNCNNCCAA CCNCTTAAAT AA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4708525 [Map]; Strand: w
      • AT1G13710.1 - [+] show detail - cytochrome P450, family 78, subfamily A, polypeptide 5
        Distance: -3868; Region: intergenic
      • AT1G13720.1 - [+] show detail - pre-tRNA
        Distance: -1110; Region: intergenic
    Flanking Genome Sequence: 13-1313-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    CATGAAGTCT AGTTGTTGAG ACATTGACAT GATTGGTCTC TCAATTTCCA
    CTTCCTTTCT TTTTTGTTCA AACATATCTA TTCTTATGCT TTACTGTAAA
    AAATCTATTA TAGACCTACA AACAAAACAG TTGTCTATAG TGAAAATACT
    CCTGATGTTA TGTCTTTTTC AATAAAAAAA ATATATATAT ATAACATGCT
    CTTTTAACTA AGTCTGTCAG AGTTCAGAGT TCCCAAAAGT CATAAATGTA
    GTTCTTTACA TAAGTATTTA ATTATTGGTC AAAGTCTATC AACTACTTCT
    ATTAGTTTCA AAAACTTTAT CAACTTTTTT TATTAGTTAA AATACACATA
    AATTAAATGT TTATTATTAT TAATGCAATA TTTCCTATTA TAAACATCTA
    AAATGATAAA GATAAATCTA AGAAAACTAA AATATGATAA TATATAATTN
    GAAATTATGT CTATTTATAT TTGAATGATA TTTATACAAA AACAAATCTC
    AAATTAAATT GNGAAACTAT CAAACAAATA TGAGTAATAG GNTATAAGAG
    GGATAATTGT CATACATTGA AAAACAAATT GTATTCATTA AAATCTATTT
    CAACATGAAG TATGATAGAT TCAAACTAAA AAAAAAAATN CCATATTTTT
    TCGANCTATN TAACAAAAAN GTNGGGGTGG NTCCAAATAC CTAAAAAAAT
    TCTTGTGGTT TNATG

AT1G13710.1

Model type
Protein coding
Short Description
cytochrome P450, family 78, subfamily A, polypeptide 5
Curator Summary
Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth.
Computational Description
"cytochrome P450, family 78, subfamily A, polypeptide 5" (CYP78A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 7 processes; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 78, subfamily A, polypeptide 10 (TAIR:AT1G74110.1); Has 31179 Blast hits to 31066 proteins in 1571 species: Archae - 49; Bacteria - 2905; Metazoa - 11364; Fungi - 6716; Plants - 9120; Viruses - 3; Other Eukaryotes - 1022 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G13720.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Thr (anticodon: CGT)
Link
InterPro Scan - TAIR