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Mutant Lines
13-1315-1

13-1315-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 18361646 [Map]; Strand: c
  - AT4G39470.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: -476; Region: promoter
  - AT4G39480.1 - [+] show detail - cytochrome P450, family 96, subfamily A, polypeptide 9
    Distance: -612; Region: promoter
Flanking Genome Sequence: 13-1315-1 - 5-prime edge
```
CATTTAGGTT CCATGGTCCT CTGGATAATG GGTTTTCTTA TCTACTTTGG 
CACAGTTCTT CCATAGTCTT AGATGATGCT CCAGGATC
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 18361762 [Map]; Strand: c
- AT4G39470.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: -592; Region: promoter
- AT4G39480.1 - [+] show detail - cytochrome P450, family 96, subfamily A, polypeptide 9
  Distance: -496; Region: promoter

CCTAAATGTG CCAAAGTAGA CAAGAACCCA AAGGTAGGTA CACAAGACAT 
CACAAACGTC TGTATCAAAC ACCACCGGCC ACACAATCCC CAGTGTTCAA 
TTATTATTGC TTTCATATCA ATTAATACGA AAGATACAGA TTCATGAGTT 
CTAATGGTAT CAACAAGTAC ATATGTGAAA GCTATTAGAA GTTAAGAAAA 
TGACAGTATA TACAATATTT CCCGTTAAAG CTAACTAACT TCTTATTTAG 
GCTTCTCATT TCAACTTATT TTGGACTGAA AATATTTTTG CTATTTCTTA 
AATATCAACA TAACCATTAA TTTATATCTA CCGCAAATTC CTTTCAAGCG 
TGATAAACCG TAATACTTTA TGTAAAAGTA ACTTAATTTT CATAAAAAAA 
AAAATNCNGG CCCATTAAAA TTAANCTTNC TAATATNCTA TTNATTTTNT 
ATNAACTTTN TTNAAAAAGT TTTTTTTTNN TTTTNNTTTT TGNAAAAAAA 
ATTTNNNNGG NNANTTTTTT TNTTTGGGGA NAAAAANCNA NTTTTNGNCC 
NTANNNTGTC CNANNCANGG GNCCGTNNTT TTNAAAAAAG GTTTTNAACT 
TCCCNCAGNN CTNCATTCCC NANCAANCAA ANTGGGANTT TNCCCCCAAA 
NANANGGGCN ACCCCNCNGN TTTTNATTTT GGAACCNNCC CCNNNNAATN 
NCCNT

AT4G39470.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT3G18420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39480.1

Model type: Protein coding
Short Description: cytochrome P450, family 96, subfamily A, polypeptide 9
Curator Summary: member of CYP96A
Computational Description: "cytochrome P450, family 96, subfamily A, polypeptide 9" (CYP96A9); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 10 (TAIR:AT4G39490.1); Has 26881 Blast hits to 26790 proteins in 1427 species: Archae - 44; Bacteria - 2309; Metazoa - 10094; Fungi - 5686; Plants - 7697; Viruses - 3; Other Eukaryotes - 1048 (source: NCBI BLink).
Link: InterPro Scan - TAIR