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13-1352-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23400448 [Map]; Strand: w
      • AT3G63350.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-1352-1 - 5-prime edge 
    CCCAGGCGTC GAGCTTCCGC AGCTCCGAGA AGAGAGGCAT GTCCTAATGA 
    TGGAGATCTC GACGCTCAGA CAGGAGGAGC AAAGAGCGAG AGGCTACGTC 
    CAAGCCATGG AGCAGAGGAT TAATGGAGCA GAGAAGAAAC AGAGGCATAT 
    GATGTCCTTC TTGATGCGTG CGGTGGAGAA TCCTTCCCTT CTGCAGCAGA 
    TTTTCGAGCA GAAGAGAGAC CGAGAGGAGG CCGCGATGAT TGATCAGGCT 
    GGCTTGATCA AAATGGAAGA GGTGGAGCAC CTGTCGGAGC TGGAGGCTCT 
    GGCGCTTGAG ATGCAAGGAT ATGGACGGCA ACGGACTGAT GGTGTGGAGA 
    GGGAGCTTGA CGACGGGTTT TGGGAAGAGT TACTCATGAA CAATGAAAAG 
    TCCGACGAAG AAGAGGCGAA TGTGAAGCAA GATTAGGTTT TATGGGTTCA 
    TGTCCGAAAA AGAAAAGTAC AAGTATCGAT CAATCAAAGC TAATGAAGAC 
    TGAGAACCAA CAAAATGAAC TATGTGTATA ATATATAGGG TTACATTACA 
    CCACAACGTC TTCTGTTCCA TTTTTTAGAA TTTTTGGTTC CTTTTATTTG 
    ATTTTTAATA GCTTTTATGT ATAATTNCTC TTTATTTANT ACTGNAGTGT 
    ATGCTATGGC TTTTANAATA AAATTTCAAT AATAN

AT3G63350.1

Model type
Protein coding
Short Description
winged-helix DNA-binding transcription factor family protein
Curator Summary
member of Heat Stress Transcription Factor (Hsf) family
Computational Description
AT-HSFA7B; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root, pedicel, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A7A (TAIR:AT3G51910.1); Has 2113 Blast hits to 2100 proteins in 228 species: Archae - 0; Bacteria - 6; Metazoa - 325; Fungi - 481; Plants - 785; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).
Link
InterPro Scan - TAIR