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13-1382-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11529388 [Map]; Strand: c
      • AT1G32050.1 - [+] show detail - SCAMP family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 13-1382-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AAAATAGTAC ACACCATTTC TTTCTTCCTG 
    AGCTCAGCTT CCCAGTCAGC AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13238584 [Map]; Strand: c
      • AT2G31081.1 - [+] show detail - CLAVATA3/ESR-RELATED 4
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 13-1382-1 - 3-prime edge 
    TTTGAAANCA AGTAGAGGTA TTTTNTCGAC CGTTACCGAC CGTNTTCATC 
    CCGCCCTTTG TNAAATATNT CGTCANTGTG CTNCTTAATT TTCTACTGAT 
    TGATGTNCTT TTGTGTAATN TCACCCAGGA TATAAAGCTG AANAGAGGAA 
    GCTATTGCTA AATGTAAGCA GATGACAACG TTGATGACAA TATTATTCAC 
    TAGTTAGGAA TAAATAGAAC TTTTCTTACA GTACTAGTTA TAAGCTGATC 
    ATGATCAAAT TAATTAAGAG TTTGTACCGC ATCACACTAA ATTAAGATTG 
    ATTTCCACCT AAATGTATTT TATACTATTT CAATTGGTGT TATTTTTTGT 
    TTGACAGTAA ATNATGAGCT TTATGTGAGT AACTTTTAAA TTGAATTTTT 
    CCAAAAACAT TTCATCAAAT GCTACACTTC TAATGTNTTT TCTGCTGTTC 
    TAGTTGAAAA TTCTCTAATA TATTTTAAAC GCGAGACTTT GATCATCNTT 
    TTTTTGATGA AAAANGGCNT TNGNTCATCA NCNATCGAGA TAAANTNNAA 
    ACTATAGGAN NAACGNAGGC TCNAGTAATT AANTANGTCN NAAGNCCGGC 
    CTCTTAGAAA NATANANGGG GGAACNACAA AAATAAANCG TACTCGGAAA 
    TANTCNCNAC NTCCTACTCT TNGCCTTAGA TAGANGTCAN CCCCACGACA 
    NAAATCAGNN ATTCAGCNTN NANCNACACA TGCNCCCNTT GNTNTTNGGN 
    CANCCGAGAT GNTTTTNTTT NNTGTTTTNN CGCGNAANAA AAATNTNNT

AT1G32050.1

Model type
Protein coding
Short Description
SCAMP family protein
Computational Description
SCAMP family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 679 Blast hits to 677 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 14; Plants - 225; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G31081.1

Model type
Protein coding
Short Description
CLAVATA3/ESR-RELATED 4
Curator Summary
Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
Computational Description
CLAVATA3/ESR-RELATED 4 (CLE4); BEST Arabidopsis thaliana protein match is: CLAVATA3/ESR-RELATED 3 (TAIR:AT1G06225.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR