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13-1395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19653079 [Map]; Strand: w
      • AT2G48060.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon17 (CDS)
    Flanking Genome Sequence: 13-1395-1 - 5-prime edge 
    GATAACACAT AACAAGATGA AGAACAGACA TATCCCATTG CAGCATTTAG 
    TCATTTTCGT TTGTTTCTCC CCATGTTTAT GTGTTGCTCG ATTTAAAACT 
    GTATCGCATT TGACAAGGTA CAAACTCGCA TTTACATCTT CCAACTGCAA 
    ACGAACAAAA CTTAAGCCCT TGGCAGTATG TTCAAACTAA CATGAGTGAT 
    CCATGATCAT AGCAAGGGTT CCAGAAAGTA AATGCATGGG ATCAGACGAC 
    ATACCTTGAG CCAGTCATAC ATTGTCAGTG ATGTAGCTGT GCAAGACCAG 
    TCAAGCACAC ATCTCAGTTC ATACAGGAAA GGAAGAGCAC GGTAAAGTCT 
    GTAACCATAG TAATTGATCC GTGATACTTC ACTTGTCAAA AACTGCCGAT 
    ACAAGGTGCT TTTATGAGGT AGTCCATAGC GGATTTGTAT GGCCTGGAGA 
    GCTAGTGACA TTGCTTTGGC AAGAAATATG ATTCTGAGAG CCAAGCCAGC 
    AGCGTGTTGC TGGGTAGGAT ATATGCTCCA AGCATACTCT GTCACTGCAT 
    ATGTGAAGAG AATAAGACTG AAGAGATAGT ATACCACTTT TCCAGTCGCA 
    AATGAGCCAA AGATNGATGA CGCGATCAAC ACCATTTAGG AAGAAGATAA 
    CCTGCCCTAA AAGCATTTNA TCGGGNTTNG GGCACTGNTN CAAAACGGGN 
    GNGACCAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19652963 [Map]; Strand: w
      • AT2G48060.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron17 (CDS)
    Flanking Genome Sequence: 13-1395-1 - 3-prime edge 
    GTGTTATCTG GGCTCCTATG CTGGTAATAA TTTTCTTACA ACACAACTTT 
    TATAATGCTT TTGTAAAGTT TTTCATTTGG AATCTGAATT ATCAATACGT 
    TCTTGGGATG AATAGTACTC ATGATGCTTG TATTTATAGG AGAAAGAAAA 
    ATTATGTGCT AGCTTAATCC AACAATTCTC TGTGATGTCT TACAGTTTGA 
    GTATTTGGTG AGTCATTTGT TTGTTGGCAA TGGCTGCTTT ATCCTTGCAG 
    ATGTATAGCA GTGGTAACCC GACAAACATT GCCAATCCGA TAAAAGATGC 
    GAGCGTTCAG ATTGATTTAA AAACAGTTGG TGGAAAGCT

AT2G48060.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link
InterPro Scan - TAIR