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Mutant Lines
13-1407-1

13-1407-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 11577410 [Map]; Strand: c
- AT4G21810.1 - [+] show detail - DERLIN-2.1
  Distance: -215; Region: promoter
- AT4G21820.1 - [+] show detail - binding;calmodulin binding
  Distance: -114; Region: promoter

ACTAAAAGGA GTGAACACTA AAAGGAGTTT ATTGATATTC TAACGGTTCC 
AGAAATAAGG TTGCAAATCT CGCCGCTTTA CTTTATTCGA TATGAACATC 
GTGACGTTTT AGTAAGTTGA AAACGCCGAA CGTTTTTAAG ATTTTTTTTC 
ACTGCAAAGA AACGCTGGCG TCAGATGCTT ATTATAATTG GTTCGTGTAA 
AACACGCGCT TTCTTATTCG TTGAGCTACT GTCACAACAG ATAAACATGC 
GGAAAAAAAG AGCGAACCTT TAACCAGTCG CTTTCGTTAA TTCAAAGCT

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 11577526 [Map]; Strand: c
  - AT4G21810.1 - [+] show detail - DERLIN-2.1
    Distance: -331; Region: promoter
  - AT4G21820.1 - [+] show detail - binding;calmodulin binding
    Distance: 0; Region: exon1 (5UTR)
Flanking Genome Sequence: 13-1407-1 - 3-prime edge
```
CTTTTAGTGT CACTCCTTTT AGTGTTTACT GTCTTTCGAA TTTTGAATTT 
GAACAAACGA CTCTTTCTCT CTAACAAATC TCCGATGGAT GAAAACGAAC 
CGCCGTGCGC TTCACCGGTG CCGCCACGTA ATCCGACGTC ATCGTTACTC 
AGTGACATAT CCAATTTCAA AACGCCGCGG CGTACTTCCG TTGTGAATT
```

AT4G21810.1

Model type: Protein coding
Short Description: DERLIN-2.1
Computational Description: DERLIN-2.1 (DER2.1); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G21820.1

Model type: Protein coding
Short Description: binding;calmodulin binding
Computational Description: binding;calmodulin binding; FUNCTIONS IN: calmodulin binding, binding; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Calponin-homology (InterPro:IPR016146), Armadillo (InterPro:IPR000225), Calponin-like actin-binding (InterPro:IPR001715), Armadillo-type fold (InterPro:IPR016024), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin 2 (TAIR:AT5G43900.1); Has 3955 Blast hits to 2210 proteins in 242 species: Archae - 0; Bacteria - 4; Metazoa - 3047; Fungi - 265; Plants - 324; Viruses - 0; Other Eukaryotes - 315 (source: NCBI BLink).
Link: InterPro Scan - TAIR