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Mutant Lines
13-1466-1

13-1466-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 7268720 [Map]; Strand: c
- AT3G20780.1 - [+] show detail - topoisomerase 6 subunit B
  Distance: -148; Region: promoter
- AT3G20790.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: -32; Region: promoter

TGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCC TCACACCACA CAACTCATGA AACACTAAGT 
CCAATCGCAA ACGCTATAAT TTAGTAAAAT GACCGATATA ACCCCAGCAA 
CCAATCTCTT TGATCGAGTT TCCTTAACTT CCCTCCATAA AACCCTAGAT 
CCTGCTTTGA ATTTTGATTG GAAACTTGTA GTGTTGTACT CTGAGACATT 
TGGTTTGATC TGACTCAAAT TTTCAAAATT TGTTGTTGTT TCAATGGCGG 
GTGATGATTT AGTTGAAACG AAGAAGGGAA GCTCGAAGAA CTCTAAGGAC 
AGCAACGAGA GCAAGCTCAA GCAAAGTAAT GCTCTATGTA TCATTTGCTG 
CACAATTGAT TTCAATTGAG ATTAAGCTCA ATTGACTCTC TTTTTTGAAT 
T

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 7268724 [Map]; Strand: c
  - AT3G20780.1 - [+] show detail - topoisomerase 6 subunit B
    Distance: -152; Region: promoter
  - AT3G20790.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
    Distance: -28; Region: promoter
Flanking Genome Sequence: 13-1466-1 - 3-prime edge
```
AAATGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
CTATAAGCAG CAACAGTTGT AAGTTAACTT GATTCTGTTT GNATC
```

AT3G20780.1

Model type: Protein coding
Short Description: topoisomerase 6 subunit B
Curator Summary: Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation.
Computational Description: topoisomerase 6 subunit B (TOP6B); CONTAINS InterPro DOMAIN/s: DNA topoisomerase VI, subunit B, transducer (InterPro:IPR015320), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), ATPase-like, ATP-binding domain (InterPro:IPR003594); Has 873 Blast hits to 542 proteins in 165 species: Archae - 495; Bacteria - 44; Metazoa - 2; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G20790.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 7400 Blast hits to 7400 proteins in 1508 species: Archae - 172; Bacteria - 5330; Metazoa - 189; Fungi - 322; Plants - 48; Viruses - 0; Other Eukaryotes - 1339 (source: NCBI BLink).
Link: InterPro Scan - TAIR