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13-1493-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3765922 [Map]; Strand: w
      • AT1G11230.2 - [+] show detail - Protein of unknown function (DUF761)
        Distance: -1439; Region: intergenic
      • AT1G11240.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 24...
        Distance: 832; Region: intergenic
    Flanking Genome Sequence: 13-1493-1 - 5-prime edge 
    GTTACAAGTC TCATGGTGAC TTCGTGGTCC CGTAATTTAT CACTTACATT 
    ATTGACAAAT GACAACCACA AGTTACTTGA TTTTGGACTT TATCACGTAG 
    TGATAAAATG AAATAAAAGA TCTTCGACTC TTTCTTTTCT GGCTCGAAAA 
    TATCTTCTAC CTAAGAGTTA AGATAAATCA AAGGCGTCTT CTAGGCAATA 
    ATCAATGGAT CAAACAATTC CAAAATGTTT ATTTCCTTAA GACGTGGCGA 
    AGGTCGAGTT TCAATTCTCA ACGAACATAC ATTTGACCAT TATTTAAGGT 
    AAATGTCGGG TCTAAAGATC TCTCGTGTCC CTGTGCTACT AGCTGCTCTG 
    ATTTATATCA ATATATCAAA ACGAAGGATC TCTTTAGTTA TTGTTTAACA 
    TTTGCAGATG AGTTACAAAA AAAATATCAA AACGTGTAAA CTGTAACATA 
    AAATGTAAGT AGTAACGAAC TATACCCTCC TTGAAACTAT ACAAAGATTT 
    GTTATAGACT GCAACTTATG TGTTACCTAC ATATATTATA TATACCATAT 
    TCGGTAAGAT TTCTATTTAG GAAATGTATT GAACTAATAA TTANATTGAN 
    TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3765806 [Map]; Strand: w
      • AT1G11230.2 - [+] show detail - Protein of unknown function (DUF761)
        Distance: -1323; Region: intergenic
      • AT1G11240.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 24...
        Distance: 948; Region: intergenic
    Flanking Genome Sequence: 13-1493-1 - 3-prime edge 
    CTTGTAACCC TAACAAAAAC GTCTTAAAAA TTGATGTCCT CATTTGTATC 
    ATACAATTTA TATATTTATT ACTAAATGGA ACACCCACAT GCATACGTCA 
    ATCTATCAAG CCCGCTAACT AAACGAAACG AATTTGTGGG AGCGTAATTG 
    ATATAGGCTA CATATCAATC CACCATAACT AAAAAAATTG ATGGGAAGAC 
    CAAATTCATA ACACAAACTC ACAAAAGCAT TGAACTATCA CACATCACAG 
    ATTCACAATT CACACAAAGC AAAGACATAA CATTGAGACC AAGGGGAAGC 
    CAATTAAACA CGCAAGGTTA CAACTTGCAA GATAGTATAG TGTCTTGTTT 
    TTTCTTTTGC TAGTATAATA TTGTCTTGTT TATTTCTTAT AATGTTGCTT 
    GTATGTAAAT CGACCAAACA GTCAAGTTTA ATTTATGTTT ACATGCAAGG 
    TATATATATT GAAAATTTAT GTTCAATTGT TTGTTTTGCA GCAACAGATA 
    ATAATACATC ACGAATAACG TAACTGCATT TTTTTTGGCT CAATCAGAAA 
    CAAGTATATA TGTTTACCAA ATCATTCTTC TCGTTTTACA ANATCTCATC 
    GTGCATCAAC TCTTCATGTG TTTTTTGTCG AACAAAACCA AAATACATAA 
    TTTATTAACT CGTATTTGGG GTAAGTACAA CAAATACGTT TGGCATT

AT1G11230.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF761)
Computational Description
Protein of unknown function (DUF761); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF761) (TAIR:AT1G11220.1).
Link
InterPro Scan - TAIR

AT1G11240.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Nucleolar protein 12 (InterPro:IPR019186); Has 2484 Blast hits to 1934 proteins in 262 species: Archae - 0; Bacteria - 90; Metazoa - 921; Fungi - 378; Plants - 144; Viruses - 18; Other Eukaryotes - 933 (source: NCBI BLink).
Link
InterPro Scan - TAIR