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13-1527-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17952833 [Map]; Strand: w
      • AT4G38330.1 - [+] show detail - Integral membrane protein hemolysin-III homolog
        Distance: 70; Region: intergenic
      • AT4G38340.1 - [+] show detail - Plant regulator RWP-RK family protein
        Distance: -1877; Region: intergenic
    Flanking Genome Sequence: 13-1527-1 - 5-prime edge 
    ATGATATCCC CCTTTTTTTA ATATAGATAT GAAGAGATGA GATTTTTAAA 
    TTGCTACAAA AGAGAGAGTC TACAATTTCG CAATTATCAA CATAATTATA 
    GAGAGAGAGG CTTTAAGAGA GGAGCATTGT TGGATGTTTG ATTAATGATG 
    ATGATATGAC TACAACAACA ACAACAAAAA AAAGTATGTG TGTATACNGT 
    GGACNATTAT TATTAGGTTG TTGACTTCAG CTGTTTCCGT TTAGTTATTA 
    AAGAGCTCCG TGATGTCATC CAATTTCTTT ATTATATACT ATACACACTT 
    TCTTATTTAT TTATCTAAAC TCATTTGCTG TACAATTTTT TAANAAAACT 
    CCCATTACCT AGTTTTTATC TTGTTAAAAG ACTTATCCCA ACGTAATTTC 
    AAAATTAGGA TTGNGGTTAA TGGATGCACA TATCTCACAA AGATTTGAAA 
    TACNATTTTT ATGAAGCATT ATTTCAAGTA AATTCATTTG ATTNGTTTTA 
    CTTATTAANA GATTCCTTAC TACTCCGGAC TAATTCGATA AAAGGAACAT 
    CCATATATGT NTAATACATA TTTCTGGATC

AT4G38330.1

Model type
Protein coding
Short Description
Integral membrane protein hemolysin-III homolog
Computational Description
Integral membrane protein hemolysin-III homolog; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: Haemolysin-III related integral membrane protein (TAIR:AT4G38290.1); Has 8 Blast hits to 8 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G38340.1

Model type
Protein coding
Short Description
Plant regulator RWP-RK family protein
Computational Description
Plant regulator RWP-RK family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Plant regulator RWP-RK (InterPro:IPR003035), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Plant regulator RWP-RK family protein (TAIR:AT1G76350.1); Has 720 Blast hits to 573 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 7; Plants - 646; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link
InterPro Scan - TAIR