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13-1634-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15967204 [Map]; Strand: w
      • AT2G38110.1 - [+] show detail - glycerol-3-phosphate acyltransferase 6
        Distance: -11710; Region: intergenic
      • AT2G38120.1 - [+] show detail - Transmembrane amino acid transporter family protein
        Distance: -5789; Region: intergenic
    Flanking Genome Sequence: 13-1634-1 - 5-prime edge 
    TATCTAAGCA CATGGAATCA TAAGTAAAAA TGGTTGACAA AGAATTAAAA 
    AGGTGGAATT GAAGATAAAA ATCAATAAAG GAAAAAGATA TTAAAAAAAA 
    TGGAAAGGCC GCAAAAAAAA GGTGGGGTCA AATGAAGGGA GCANAAGGGA 
    ACAAGGTCCG AAATTTGATC CCCGTTGGAA ANACCATCTT CTGCTCTCCA 
    TATCCTTCTC CTCATCATTA CTTCTCCCAC TCCCATATCT TTCTCATTTT 
    CCATACACAT CTTGCGTAAT TTTTTACTAT ATCTTTTACA TTGTTTATCA 
    TAACCACAAA AATTATAATG TANAATACTA NAATTTGTTA CTATACAACA 
    ACTCGTTGNG TACTTTTCTG TGCAGNGTTA NAATATGTAC AGCAAGTCAG 
    CAACAACCCA AATACCACTT CCAAAAGGGT ATGTGTCATT ACATAGTTAT 
    CATTACATAG TTATGTATTG TTGAACTTTG GTCGTATTCT TATAGTTCTC 
    GTGCANATAG TATATAACTC GTTTCAGCTA TGTTTGTTAA AGGTGTAACA 
    TAACGAGCCG ACAATAACTG AAACATTCAT TCGGNCTTAN ATTGGNGGTA 
    AACACATCAA TGGCTAAAAT TACTGAACTC ATTGGGNCCG AGGGGTCTTT 
    ATTGGTTTCA AGTTTCACCN AACATGTGTT TGGGGTTAAA TTTTTCTACA 
    CCACCTGGT

AT2G38110.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 6
Curator Summary
Encodes a protein with glycerol-3-phosphate acyltransferase activity.
Computational Description
glycerol-3-phosphate acyltransferase 6 (GPAT6); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 8 (TAIR:AT4G00400.1); Has 444 Blast hits to 431 proteins in 52 species: Archae - 0; Bacteria - 47; Metazoa - 20; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G38120.1

Model type
Protein coding
Short Description
Transmembrane amino acid transporter family protein
Curator Summary
Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning.
Computational Description
AUXIN RESISTANT 1 (AUX1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: like AUXIN RESISTANT 1 (TAIR:AT5G01240.1); Has 1256 Blast hits to 1251 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 283; Plants - 825; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).
Link
InterPro Scan - TAIR