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13-1662-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23315989 [Map]; Strand: c
      • AT1G62950.1 - [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1662-1 - 5-prime edge 
    ACTCCATCGA AAGAATTGCT TCCTATATCG ACATGACTCA ATCTCTTACA 
    CTTCGATATC TCCTCAAAGA CATCACCAGA CAACAAATTT CTTCTAACAG 
    ATACAAACTC AAGAACCGGA ATATCGCAGA TCCGAGGCAA CAAACCGGTA 
    ATGCCATTGT AAGAGAAATC GAAACCAATG AGATTGTTAC AGTTTACGAT 
    TGATTCAGGG ATTGATCCTG AGAGATTGTT ATGAGACAAT GAAACAAACT 
    TTGTCTTGTA ACAGAATTTA AACAGAGAAT TTGGAATCTC TCCAAAGAAC 
    GCATTTTTCG ACAAATCCAA GAACCTTAAA TTAGGCAAAT CACCGATAAA 
    TTCAGGAACC AAACCAGACA ATGCATTGGA ACTAACATTG ATCTTCCATA 
    AAGTCTGTAA CTTTAAGTAA TCCAAAGGTA AATTACCTGT AATCCTGTTG 
    CCAAACAGAG TCAAAACCCT TAAAGAAGTT AAACCAGACA ATGCCGGCGT 
    TAGGGTTCCG GCGAGACTAG TGTTCCAAAG AACGATCTTT TCGACGAATC 
    CTTCTTGGTT ACAAGATACA CCATTGAAGC TGTTACAGAG GTCAGCATTA 
    GAGACCCAAG AAGCTAAACT GTTGTACGGA TCATCGTTGA TGTTGTCTTT 
    GAATTGAAGT ANAATCTCTC GTTCGGTATT ATAGAATCCG ANAACTTCGA 
    GATGATGTAA TA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23316105 [Map]; Strand: c
      • AT1G62950.1 - [+] show detail - leucine-rich repeat transmembrane protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 13-1662-1 - 3-prime edge 
    GATGGAGTAG CGTCTTTCGA GGTTATTGGA TTCAAGAACC TGACTTATTT 
    TAATGTGTCT GGAAACCGGT TTAGAGGGGA GATTGGTGAG ATTGTTGATT 
    GTAGTGAAAG TTTGGAGTTT TTGGATGCTT CTTCGAATGA GTTAACNTGG 
    TAATGTACCT AGCGGTATAA CCGGATGCAA AAGTCTTAAG CT

AT1G62950.1

Model type
Protein coding
Short Description
leucine-rich repeat transmembrane protein kinase family protein
Computational Description
leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G12460.1); Has 173083 Blast hits to 114691 proteins in 4339 species: Archae - 116; Bacteria - 15745; Metazoa - 52877; Fungi - 7816; Plants - 76612; Viruses - 257; Other Eukaryotes - 19660 (source: NCBI BLink).
Link
InterPro Scan - TAIR