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13-1675-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1993571 [Map]; Strand: w
      • AT3G06483.1 - [+] show detail - pyruvate dehydrogenase kinase
        Distance: -827; Region: promoter
    Flanking Genome Sequence: 13-1675-1 - 3-prime edge
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    TTCAGGCATG CTTATAAGTT TGGCCCAAGA CTTTGTTGCC TACAAAACTG
    CGGATTACAT GGGATGAACT AATTATATTT TCATATATTA ATATAACGAA
    AAATGTTACA ACATAATTTT TACAAATTAA AAAATAAAAT TACAAATCAT
    AATTTATTTT TCCTTCTAAA TTTCTGCAAA TAAAATTAGT TTTTTTTTTA
    TTACTAGTCA TTAACAATTC GGANAANAAT AAACATTCCT CTAACTCTTA
    ACAATTTTAA CTTTANCTAG GTNCNCAAAA TATTANACTA TNCAATTTAC
    NATTTNGGTT TTGGGCATTT TTTTTTAAAA TAATAAAAGC T
  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1993564 [Map]; Strand: w
      • AT3G06483.1 - [+] show detail - pyruvate dehydrogenase kinase
        Distance: -820; Region: promoter
    Flanking Genome Sequence: 13-1675-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA TGATGCCTCG ATGTAGATTG TAGAGGAGTC
    GCAATTTGAA GTTTCGACAT ATGTTTTGTA TATTTTGGAA CAACATAAAG
    AGATTGTGTT TGACTTCAAT ATCTTACCGA CTTCCCCGAA TCTCAATGGC
    NTTGCTTTTT CTGAAGCGAC GACATCTAAT ATGTCATTGA CCTTAATTTA
    TTTTATTCAT ATTTTGTTAC TTCTCCTTCT GCATCATGAG TTTATCTTGG
    ACTTGTTCAC TCTATTTTCT GTTGTTTTTC CTCCTCGGTA CGAGGTTTTG
    TTGGCCGATA TTCAAATTAA GTTTGGTATC TAATACATCA TCTGAGTTCC
    ACATTAACGA ACAATGTTCT ACATAAATTC GGTCCTTAAA TAAAAAACCA
    CTAAATTAAA CTACACTATA TAATTTGGTG CTTAGTTATA TTTAGTTACG
    ATTAATGAAC ACATATATAT ACAAACACAA TTTCGTTGTC CTTACGGTAT
    TAAATATGGG CAGTGCTTAG GACCAACTTA GTCATTTCTG TAAATTTGGT
    TTCGACTTCG ACTACAAAAT GTTTACCATC TCATCTCACA ATTATTTTAT
    GATATGTATT TTCAGAATAA AGTGGGTTCT CACTGCAGTT TTACATTTCT
    GCGTNAATAC TCTTGTTTGA CAAATACCTT GATGGCTCTA TAACTACTTG
    ATGGGAAACC GTACATTAAT ATTTATNTTA ATCAAA

AT3G06483.1

Model type
Protein coding
Short Description
pyruvate dehydrogenase kinase
Curator Summary
Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.
Computational Description
pyruvate dehydrogenase kinase (PDK); FUNCTIONS IN: ATP binding, pyruvate dehydrogenase (acetyl-transferring) kinase activity, histidine phosphotransfer kinase activity; INVOLVED IN: signal transduction, peptidyl-histidine phosphorylation, phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, core (InterPro:IPR005467), Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, mitochondrial (InterPro:IPR018955), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); Has 1925 Blast hits to 1799 proteins in 531 species: Archae - 0; Bacteria - 712; Metazoa - 467; Fungi - 468; Plants - 102; Viruses - 0; Other Eukaryotes - 176 (source: NCBI BLink).
Link
InterPro Scan - TAIR