1. Home
  2. Mutant Lines
  3. 13-1735-1

13-1735-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16831530 [Map]; Strand: c
      • AT5G42100.1 - [+] show detail - beta-1,3-glucanase_putative
        Distance: -311; Region: promoter
      • AT5G42100.2 - [+] show detail - beta-1,3-glucanase_putative
        Distance: -291; Region: promoter
    Flanking Genome Sequence: 13-1735-1 - 5-prime edge 
    GTTGGATTTA GTCAAATTCT GGTGTATTGG AAAAAAGACT AGTTGAAGCA 
    AAGAGGCTGT TGAAAGACAT GAGTGGTAGA TGTTCTAGTT GGTGTGCTGT 
    CTCCATGTAG CTGTCTCAAA TACCTAGCAA GTGTTGTAAT GAGAGCACCG 
    AGAGAGAAGA GGACAAGAAT GATCTGTCAT GAGAGAAGTG AGAATCCGAG 
    AGGAAGCAAA ACAAGAAAGA TGCTCTCTCC TCTACTGCTT GCTCCAGAGA 
    CACTGACTTC CAGCTCATCC AAACCAACAT TACTCTTTCT CTTTCTTCTT 
    TTCAATTATT TCTTTATTAC TATTTCACTT TGAAATTTAG TGAATCCTAA 
    CGCTCTGGTC CCATCACTGC CTCCTCTATC ATCTTGCTCA CAACCACTCA 
    CTACGCTCTC TCTCTCTCTC TCACTTCATC TATGGCTTCT TCTTCTCTGC 
    AGTCTCTCTT CTCTCTGTTT TGCCTTGCTC TGTTCTCTCT TCCTCTCATC 
    GTCTCCTCCA TCGGCATCAA CTATGGCCAG GTCGCTAACA ACCTTCCTCC 
    CCCTAAAAAC GTCATCCCTC TCCTCAAGTC TGNGGGAGCT ACAAAAGTCA 
    AGCTCTATGA CGCCGATCCA CAAGCCCTAC GTGCCTTCGC CGGCTCCGGC 
    TTNGAGCTCA CCGGGGCCCT CGGTAACGAG TNCCTGGCTC AAATGAGCGA 
    CCCTNTTAAA GCCCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16831646 [Map]; Strand: c
      • AT5G42100.1 - [+] show detail - beta-1,3-glucanase_putative
        Distance: -427; Region: promoter
      • AT5G42100.2 - [+] show detail - beta-1,3-glucanase_putative
        Distance: -407; Region: promoter
    Flanking Genome Sequence: 13-1735-1 - 3-prime edge 
    AATCCAACTA GGTTGATGAC CTTGAACGGC TCTTTAAAGT TTAACCAGAT 
    ACAACCCAAT GATTCAAAAC ACCAATTAGA GCCATCGCCA CACATTGCTT 
    TGTCTCATAT AAAGTAAAAG CACACCAACA TATGAATAAA GTTTAGCTCA 
    CAACAAGAAA GAGTTCAATT TAGCATATCC CTTGAAAGCA AAAGAATGTT 
    AATAAATTCT CGTTACAGAG ATAATAGAAG ACAACAAAAG AGAAGATGAG 
    AATGATAAGA TTAAAGACCT AAGTGACGCA CTCACGCTTT GAATGGAAAA 
    AACAAAGCT

AT5G42100.1

Model type
Protein coding
Short Description
beta-1,3-glucanase_putative
Curator Summary
encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd
Computational Description
"beta-1,3-glucanase_putative" (BG_PPAP); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, glucan endo-1,3-beta-D-glucosidase activity; INVOLVED IN: cell communication; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G42100.2

Model type
Protein coding
Short Description
beta-1,3-glucanase_putative
Curator Summary
encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd
Computational Description
ATBG_PAP; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, glucan endo-1,3-beta-D-glucosidase activity; INVOLVED IN: cell communication; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT1G32860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR