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13-1748-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10884106 [Map]; Strand: c
      • AT4G20140.1 - [+] show detail - Leucine-rich repeat transmembrane protein kinase
        Distance: -91; Region: promoter
    Flanking Genome Sequence: 13-1748-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGC AGTCATTAGA AACGGTGCAT AGGGACTCTA 
    TCTCTGAGTT GGAGAAGAGT AAATGCAGAG AGAACAAAGT TTCTTTCTCT 
    CTCTCTTTTT TGTGTTTCTT TTTTGCTATT TCACCTGTTT TATTGAGAGA 
    TCTAGAGAGA GAGGAGAGAG GGGTCAAAGA GAGGTCAGAG GAGAGATGTG 
    GGGAAATGGA ATGGGAAGGC TCGTAGAATG AAAATGTTTC GGCTTTTAGC 
    CTTTTATCAA TCAATGGAGG GGCAAAGGTC AACGGTCGTA CTATGATGTT 
    CGTGTGTACA TTTATTCGTC CGTGGAGACA TGTTATATAA TTAAAACAGT 
    GCCTAAACTT TGACATAACA TTTGGTCTTC TTAGGAAAGA AAAAAAAAAA 
    ANNTTTGGGN TTTTTTTAAA ACCCCCAAAN TTTTTAANNA ANTGGGGGGG 
    GGGCCCCCTT TNNTTTCCNN TAAANNTNGA AAANTTTNAA GNTCCNACCC 
    GGGNCCGNAA NCNCCCCNNC CCCCTTAAAA

AT4G20140.1

Model type
Protein coding
Short Description
Leucine-rich repeat transmembrane protein kinase
Curator Summary
Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.
Computational Description
GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink).
Link
InterPro Scan - TAIR