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Mutant Lines
13-1803-1

13-1803-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4394442 [Map]; Strand: w
- AT1G12900.1 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
  Distance: -42; Region: promoter
- AT1G12900.2 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
  Distance: -42; Region: promoter
- AT1G12900.3 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
  Distance: -99; Region: promoter
- AT1G12900.4 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
  Distance: -48; Region: promoter

GGGATACGGN AACACTAACA AATCGGCTAT ACGATNACGG TCGGNACGGG 
ATTTTCCCAT CCTACTTTCA TCCCACGTTT TCTATGATTC ACACATATTT 
TTGATTTTCT CACTTGGGCT TCACAAGTGG ATGGGCCTTC TCCATCATGT 
GGTCACATTT GATCTAGTGA CTCGACGACA TAGCTTTTCT GACATCTCTA 
TGCCTGCAGA TGAAAATCAC TGACACATTA AGAAGTGTGA CCCTTCTTGC 
TCCTTCTTAG CCATTTAAAA GATTACACAT TTTGTCTTTG TAATCTCAAA 
GAAAGATGTG TCATTATGTC TCTTTACCTT TTTGTTTTGC GCATTGACTT 
TATAGAAAGC TATTCCAAGA AATACAATAG GTACTGAGAG GTGTAACTAA 
CTCTAGCAGT CCATAGCTCT AATCAAATAC AAAACTAAAC CTAATCATCC 
ACAATTGAGG TACACACTTC CCATGGATCA TACTGCAAAG ATTGTGCTAC 
GAGAGAAAAA GCAATGAAGC AAAAATCTAG ATCAAAGGAT TATCCTTTCT 
TATCAATCAT ACATCAATAA GAGTCAGTGC TAANCT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 4394445 [Map]; Strand: w
  - AT1G12900.1 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
    Distance: -45; Region: promoter
  - AT1G12900.2 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
    Distance: -45; Region: promoter
  - AT1G12900.3 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
    Distance: -102; Region: promoter
  - AT1G12900.4 - [+] show detail - glyceraldehyde 3-phosphate dehydrogenase A subunit 2
    Distance: -51; Region: promoter
Flanking Genome Sequence: 13-1803-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ACTGAAGAGG GAAGACAGAT AAAACCACAA CCATACAAAT GAATGACAAA 
GCTATCCAGA ATCTCATCTT CTTTGCCTCC AACTCAGCAA TTCATATTTT 
CCTATATTAC AACTCTCTGC CTCTTCTGCT TACATCATAC AACAAGCT
```

AT1G12900.1

Model type: Protein coding
Short Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Computational Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24704 Blast hits to 24695 proteins in 6149 species: Archae - 47; Bacteria - 10700; Metazoa - 2230; Fungi - 2778; Plants - 3753; Viruses - 0; Other Eukaryotes - 5196 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12900.2

Model type: Protein coding
Short Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Computational Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: glycolysis; LOCATED IN: apoplast, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 24213 Blast hits to 24212 proteins in 6137 species: Archae - 36; Bacteria - 10763; Metazoa - 2201; Fungi - 2756; Plants - 3727; Viruses - 0; Other Eukaryotes - 4730 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12900.3

Model type: Protein coding
Short Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Computational Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; LOCATED IN: apoplast, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12900.4

Model type: Protein coding
Short Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Computational Description: glyceraldehyde 3-phosphate dehydrogenase A subunit 2 (GAPA-2); FUNCTIONS IN: NAD or NADH binding, glyceraldehyde-3-phosphate dehydrogenase activity; INVOLVED IN: oxidation reduction, glycolysis, glucose metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit (TAIR:AT3G26650.1).
Link: InterPro Scan - TAIR