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13-1838-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3495766 [Map]; Strand: w
      • AT1G10585.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -622; Region: promoter
    Flanking Genome Sequence: 13-1838-1 - 5-prime edge 
    CTTACAACAT GNACATATAT AATGTTGCNA TCANCCAATG GAAGAAGGAA 
    ACATTGCNTG GNATACTTGA TANAATCGGG ACCACGTAAT ATCNNATATG 
    TATGATCATG TNCAGTTAAT TTGGTGCACG TATTCATTAT CCGAGGAAAG 
    TATCATAAGG CGCCATAACC TAAGATTATT CAACAAGCTA TCATTATCAT 
    AGAAGAAAAG GACACAACAC ATTCGGCATT CCTTACATAA ATTATTAAAG 
    GCCCTCAACT CTCTTTGGCC GTATGGCCGA CATCGTTCAC CGGATAGGGG 
    ATCTACATGG ACCGATCGTC TAAACGTTCA CCGGAGGTGA ATACAAAGAC 
    AGAAAATTAA ACATGCCTAG TTTTGTTGAG TCTTGGAGTA CTCCAGGTAG 
    ATGTTGGTCA TAACTTTGCC ACTGAGCAAA CTGACATAAA AAGTAAAAGG 
    AGCCGCANTA TGATACTAAC ACTGNGNATA TATCGTNTCG CTGCTTGACC 
    ACTTGCTTAN AAACTGANTA AGGGACAANT NTNTCCTTAT TGGATTTTNC 
    NCAGGNNANN NNNNTTTNCT TCTTNNNNNT TTTGAATTNN ANNNNNGGNC 
    NNNNACCNCC CCCCCCCNNN NNNGGGGNGG GGGNGANAAC AAACNCCCNN 
    CCCCNNC

AT1G10585.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G10586.1); Has 97 Blast hits to 96 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR