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13-1839-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3729209 [Map]; Strand: c
      • AT1G11150.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 13-1839-1 - 5-prime edge 
    ATCCTCCATA CCAATTTCAA ACAACTAACC TTGTTTGCCT CTACTAGTGA 
    TTTAATTCCC AGCCCTCCCT CATTTATTGG CTTACAAATC TCGGTCCAAG 
    CAATCTTAGC TCTGTTGGGA TTAAGATCCG GTCCAGACCA CAGAAAAGCC 
    GCACAAATCT TCTCAATTTC CTTTAAACAA CTGTTTGGTA ATCGATAAGC 
    AGATATCCAG AAGTTGGTGA TACTTACAAG TACTGATTTG ATGAGAGTAA 
    GGCGGCCTGC GTACGATAGT GCTCTTGCAG TCCATGAGCT GATTTTTGAT 
    CTAACCTTTT CTTTTTATTA TTCTTCTTAT CTTTCTTCTC TTTCTCTTTC 
    TTTGTGTTGA TGATGCAATC ACCACTCGAT TCTCTGCCTC CTCCATCAAT 
    AATAGTATTG CCTCTATCTC TCTCTCTGCT GAGCAAATAT TTATATCTCA 
    AAGGGATAAA AGGAACAAAA TCAAGCATTT AAGGGGGTGT ATTCAATCTT 
    ATATTTTGAG TGATTTGAGG TAAATTGAGT TTTTCTATGT TTTTATGATT 
    TTGGGTGGAT TTAAGGAAAC CATTCAAAAC CNCATGCCCC CTTAAAGCCN 
    TAANAATTAA AAANCTCTTA CAANNCATTA TNAATNTAAT CCTTAANTTT 
    TNAANGGACG TGAAAATNTT NGNNTAAANT TTNAGNCTCN NNNCCGGGCC 
    NCNNCCCC

AT1G11150.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30% identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus}
Link
InterPro Scan - TAIR