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13-1883-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 352993 [Map]; Strand: c
      • AT2G01810.1 - [+] show detail - RING/FYVE/PHD zinc finger superfamily protein
        Distance: 2814; Region: intergenic
      • AT2G01818.1 - [+] show detail - PLATZ transcription factor family protein
        Distance: 464; Region: intergenic
    Flanking Genome Sequence: 13-1883-1 - 5-prime edge 
    TNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCG CACGTTATCA TTCGGAGCCA AGTCATAATC 
    TTTCTACGAT ATTGTCATTT GTAAAAATTA CATGGTTTGG TAAACTTCTC 
    CATATTTCAA TTCCTATTCC TGTATTTTTG CAACATTCTC TTTTTGGTTT 
    ATAATAAAAA TGAAAAATTA TACGATTCAA CACTCCATTT AAGTTATTCG 
    GGCTAACGAG TTTACCATTT TATGTAGTAG TTTTTCTTCT TCTTTAAATT 
    AACGACTTTT CAATATGTCA ATATGCATTG TTACAAATTG GAGCAATGGC 
    CCGTAGTTGT TATCGTGACT TTTTGGGTGT TTAGCAAATG TGTCATTTTC 
    CGTAAAAAAA GAATAAAGTA TCAAGTATAT GANAAAATTC CATGATCATT 
    GGTGTATATC ACAAAGACTA AATATAAATC ATTCTTTAAC AGAAGTATAC 
    GAAGATATAG CGTACATTAT AACAAATGAA TGAATGATCA TGATAATGGG 
    TCTATGGCAA CTTGTTTTAC ATATTTTTCA TATCAAACAA CTTTATTTTT 
    CCTTTTAAAT AGTATTACCT ATCATTATCA TTTCTTCTAT TTATTGGAGA 
    TCTTTGAATA TACTAATGTT AATATTTCAT AACTAAAGAG ATAGAACCGA 
    GATTGACAAA CAGAAAAATG AAGCACGGAA GCNTCACGAT TCACGATTAT 
    GATACATAAT ATAGATTAAT TATTATT

AT2G01810.1

Model type
Protein coding
Short Description
RING/FYVE/PHD zinc finger superfamily protein
Computational Description
RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 216; Plants - 250; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01818.1

Model type
Protein coding
Short Description
PLATZ transcription factor family protein
Computational Description
PLATZ transcription factor family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF597 (InterPro:IPR006734), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: PLATZ transcription factor family protein (TAIR:AT3G60670.1); Has 397 Blast hits to 397 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 397; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR