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13-1913-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 284051 [Map]; Strand: w
      • AT4G00695.3 - [+] show detail - FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein m...
        Distance: 0; Region: intron1 (5UTR)
      • AT4G00695.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: intron1 (5UTR)
      • AT4G00695.2 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskelet...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 13-1913-1 - 5-prime edge 
    TAATANAAAC NTNAATATNA CGGGCAAAAC TAACAAAACG GTTATACGAT 
    AACGGTCGGT ACGGGATTTT CCCATCTTAC CTCTTGTTAG CTANGGTTTT 
    ATCTTAACCA TTAATTTAGT AATATAGGAT TCTTGTTTTC AAACAGTGAA 
    TGGAGGAATT AAGCCAAATC TTGAAGAACA ATAGGACCGA TGATCTCACT 
    TTGGTTTTGC TCTCTCTCAG AATCTGAACT GGTAAATATT GTTTAATCAT 
    TCTCTTTCTT TCTGCAGTCA AAAACTAACA TTGATCAATC ATTTTTTNNT 
    NNTTTGCTCA TCAGCTTAAA AAAGCTAGTC ATTCGACGTG CCNNANCNCN 
    NTGGTCTNGA ANATC

AT4G00695.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 27 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.2

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: microtubule cytoskeleton organization; LOCATED IN: spindle pole, microtubule organizing center; EXPRESSED IN: cotyledon; CONTAINS InterPro DOMAIN/s: Spc97/Spc98 (InterPro:IPR007259); BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00695.3

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; BEST Arabidopsis thaliana protein match is: Spc97 / Spc98 family of spindle pole body (SBP) component (TAIR:AT1G80245.3).
Link
InterPro Scan - TAIR