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Mutant Lines
13-1914-1

13-1914-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 220484 [Map]; Strand: w
- AT4G00480.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -741; Region: promoter
- AT4G00480.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -741; Region: promoter

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TAATACATGT CGGGGTCTTA TTGTCTTACA 
ATCATTATAT ATTTGTATCT ATCTTGTTGT GTGGAAATGG AACGTATCGA 
CCTACATTGT TTTTTTGTGT TTTGGTAAAC GTATCAAGTA TCAACATACC 
TTTAACAACC AAAAAAATTG AACTCTTTGT CTGGCTCACA TCAATGAAGA 
TGATTAATTT TTTATTACTC GATCTTAAAT ATATGACAAA CAGAATGTAG 
TAATACGTAG TTGCAAGAAA ATGGAATATA CTATTTGGAT AGTGAAGATT 
CTAGTTTCTA TGATAGATAT AAATGCGCAT TTCACCCGAA TAATTCCATG 
ATACTCTAAT AGATTATATA TTAAACAAAT ACACACTACT GTTCAAGTTT 
GATAATCAAT CGCGAGACAT CGCATATACC GATCGTTATT TGTTTACCAT 
CAAAGCACTA TTTTGTCCGA AGTAAGTAAA TATAGCAAGT GGCAGTAAAA 
AAATAGTAAT AAAATTGAAG GCAAGATCAG GAGAGAGCTG GCTGAAATGA 
AGGCAAGAAA CTCGTGAAAA TAATAATTGA TCCATCTNTA TCCACGAAGC 
CCTACNTAAT TTATTAACCC ACCACTTGGG GGTGCATGCA CATTTATTTC 
CATAACGACA AAACTTTGGG GTTAATTTTA TAAATTATTT CTGNNGGCNC 
ACACACTCAT TNTAGCCNTT GGTTG

3 prime edge [+] show sequence

Chromosome: 4; Position: 220478 [Map]; Strand: w
- AT4G00480.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -735; Region: promoter
- AT4G00480.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -735; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ACGAAAAAAA AAGTAACTAA GTTTATATAA ACCAACACAA GTTTAACTAA 
NAATCTAANA ATCTCTACTT TGTTGATTTC ATAAGNGTAT TCATCTAAAT 
TAGTTATAAG TNCAATGTAA TATCAACATG TATTTATATN GTCTCTTGTN 
GGATATTAAC TATCCAAACC AAACCTATAA TATGAAATCA TCAAAACATT 
AATCATTATG GTCAAACTAT CTCAAGTNGT ATTCTTTAAA AAGNGTCACG 
ATAAACTCTA ACATCATAGN GGATTTAANA CAAAACAAAT CCAAAAGAGT 
TAAAAANATC GGNCTTAAAT TTATGATTCA TATCCATGCA TGANGTNGGC 
CAATCNCCTA GTNTAGTAGT AATAACCAAG CT

AT4G00480.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary: MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus
Computational Description: ATMYC1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 1473 Blast hits to 1082 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00480.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Curator Summary: MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus
Computational Description: ATMYC1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G63650.3); Has 1481 Blast hits to 1090 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1462; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
Link: InterPro Scan - TAIR